RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 HNF4GQ14541 408 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 MMDQ15546 238 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 TMEM177Q53S58 311 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 FAAP20Q6NZ36 180 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 Q8N9W7 124 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 ZNF486Q96H40 463 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 RSRP1Q9BUV0 290 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 CCDC32Q9BV29 185 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 LIN7CQ9NUP9 197 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
CDC42SE1-203ENST00000470278 NBR2O15453 112 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 KIR2DS2P43631 304 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 CATR1Q13166 79 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 SURF2Q15527 256 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 BAK1Q16611 211 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 TRIQKQ629K1 86 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-203ENST00000470278 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 TNFSF12O43508 249 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 IL7P13232 177 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 CD40LGP29965 261 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 LGALS7P47929 136 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 F2RL1P55085 397 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 BLCAPP62952 87 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 SCGB2B2Q4G0G5 96 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 OR51S1Q8NGJ8 323 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 LINC01006Q8NI28 216 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 TCTEX1D2Q8WW35 142 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 RITA1Q96K30 269 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 KIAA1456Q9P272 454 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 SCP2D1Q9UJQ7 156 aa11.86□□□□□ -0.51
CDC42SE1-203ENST00000470278 CLPSL1A2RUU4 121 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 PGLYRP1O75594 196 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 S100GP29377 79 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 PPP5CP53041 499 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 RND3P61587 244 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 C5orf64Q2M2E5 130 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 AWAT1Q58HT5 328 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 IDO2Q6ZQW0 420 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 CD300LFQ8TDQ1 290 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 RBMXL1Q96E39 390 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 MCUBQ9NWR8 336 aa11.85□□□□□ -0.51
CDC42SE1-203ENST00000470278 RRHO14718 337 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 FCGR3BO75015 233 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 CRYZL1O95825 349 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 HLA-DRB1P01911 266 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 RLN1P04808 185 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 CNTFRP26992 372 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 INPP1P49441 399 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 ZFAND1Q8TCF1 268 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 RASL11BQ9BPW5 248 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 FAM212BQ9NTI7 297 aaPredicted RBP11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 SERTAD4Q9NUC0 356 aa11.84□□□□□ -0.51
CDC42SE1-203ENST00000470278 SHOXO15266 292 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 IGHG2P01859 326 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 PGAM2P15259 253 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 F2RP25116 425 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 PROK1P58294 105 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF846Q147U1 533 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 PSG5Q15238 335 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 Q6ZS46 218 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 POC5Q8NA72 575 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 OR51H1Q8NH63 302 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 MARCH1Q8TCQ1 289 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 C7orf50Q9BRJ6 194 aaKnown RBP11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
CDC42SE1-203ENST00000470278 NAP1L6A6NFF2 107 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 RAMP3O60896 148 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 PIGPP57054 158 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 UBE2KP61086 200 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 OR2B11Q5JQS5 317 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
CDC42SE1-203ENST00000470278 CCDC71LQ8N9Z2 235 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms