RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 CHTOPQ9Y3Y2 248 aaKnown RBP1.25□□□□□ -2.21
ITGA6-209ENST00000470259 A0A087WTM6 91 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TRAV26-2A0A0B4J265 109 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 FAM240BA0A1B0GVZ2 78 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 NDUFC2-KCTD14E9PQ53 114 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 LSM1O15116 133 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 EEDO75530 441 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 IGLV7-43P04211 117 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 SNRPAP09012 282 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CCDC172P0C7W6 258 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 PGA5P0DJD9 388 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 SDC4P31431 198 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 NUP62P37198 522 aaPredicted RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 KRTAP12-1P59990 96 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 MRPS22P82650 360 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TGM3Q08188 693 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 BIKQ13323 160 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 IL18Q14116 193 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CDK5R1Q15078 307 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 SSX2Q16385 188 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TMEM176BQ3YBM2 270 aaPredicted RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 ZNF404Q494X3 552 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CCSMST1Q4G0I0 132 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TRMT12Q53H54 448 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 ACSBG2Q5FVE4 666 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CPTPQ5TA50 214 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 PRAMEF5Q5TYX0 476 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 PRAMEF6Q5VXH4 476 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CARD17Q5XLA6 110 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TTC19Q6DKK2 380 aaPredicted RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 SLC16A14Q7RTX9 510 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 GLT6D1Q7Z4J2 308 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 NKAIN4Q8IVV8 208 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 Q8N402 240 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 NPWQ8N729 165 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 DRAXINQ8NBI3 349 aaPredicted RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 MNS1Q8NEH6 495 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 OR9K2Q8NGE7 335 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 OR11H2Q8NH07 326 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 FAM81AQ8TBF8 368 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 C10orf82Q8WW14 230 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 BPIFA3Q9BQP9 254 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 CHCHD7Q9BUK0 85 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 ZNF436Q9C0F3 470 aaPredicted RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 IQCGQ9H095 443 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 TRABDQ9H4I3 376 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 METTL8Q9H825 291 aaKnown RBP1.24□□□□□ -2.21
ITGA6-209ENST00000470259 KCNE3Q9Y6H6 103 aa1.24□□□□□ -2.21
ITGA6-209ENST00000470259 IZUMO1RA6ND01 250 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 SUPT3HB4E1H0 165 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 KRBOX1C9JBD0 128 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 LINC01619G3V211 115 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 ACOX3O15254 700 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 POLR3GO15318 223 aaPredicted RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 RNF13O43567 381 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 SPOPO43791 374 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 PLIN3O60664 434 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 ADAP1O75689 374 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 TMEM50AO95807 157 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 NPPAP01160 153 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 EIF4EP06730 217 aaKnown RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 CD79AP11912 226 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 NTF3P20783 257 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 TGM4P49221 684 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 SYNJ2BPP57105 145 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 SEC61GP60059 68 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 EIF3EP60228 445 aaKnown RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 RPL23P62829 140 aaKnown RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 TMED2Q15363 201 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 KCNJ8Q15842 424 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 USF2Q15853 346 aaPredicted RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 KLHL12Q53G59 568 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 FBXO48Q5FWF7 155 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 C6orf226Q5I0X4 101 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 NPSR1Q6W5P4 371 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 DGAT2L6Q6ZPD8 337 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 BZW1Q7L1Q6 419 aaKnown RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 MDP1Q86V88 176 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 PHF13Q86YI8 300 aaPredicted RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 GTPBP8Q8N3Z3 284 aaPredicted RBP1.23□□□□□ -2.21
ITGA6-209ENST00000470259 SPATA4Q8NEY3 305 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 BPIFCQ8NFQ6 507 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 OR2Z1Q8NG97 314 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 OR1L6Q8NGR2 347 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 ZNRF2Q8NHG8 242 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 FAM172AQ8WUF8 416 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 TMBIM1Q969X1 311 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 PANX1Q96RD7 426 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 CHP1Q99653 195 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 HAUS4Q9H6D7 363 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 PLEKHA1Q9HB21 404 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 CHRAC1Q9NRG0 131 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 VAX2Q9UIW0 290 aa1.23□□□□□ -2.21
ITGA6-209ENST00000470259 IGLV3-9A0A075B6K5 115 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 IGHV3-72A0A0B4J1Y9 119 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 M0QZK8 103 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 AKR7A2O43488 359 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 EIF4E2O60573 245 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms