RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PITX3O75364 302 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 TIMP3P35625 211 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 PAM16Q9Y3D7 125 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 IGKV1D-43A0A0B4J1Z2 117 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-213ENST00000469300 ARF6P62330 175 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 BSPH1Q075Z2 132 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 PSG5Q15238 335 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 DHRS11Q6UWP2 260 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 SSMEM1Q8WWF3 244 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 TM2D1Q9BX74 207 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 ZNF716A6NP11 495 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 GCGP01275 180 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 BMPERQ8N8U9 685 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 TMEM191AQ9H0A3 160 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 SLC2A8Q9NY64 477 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 NAT8Q9UHE5 227 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 MED19A0JLT2 244 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-213ENST00000469300 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
LIMS2-213ENST00000469300 CD1BP29016 333 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 NPBWR2P48146 333 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
LIMS2-213ENST00000469300 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
LIMS2-213ENST00000469300 ACP7Q6ZNF0 438 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
LIMS2-213ENST00000469300 CXorf1O96002 111 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 CFDP00746 253 aaPredicted RBP12.84□□□□□ -0.35
LIMS2-213ENST00000469300 ID1P41134 155 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 DLK1P80370 383 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 MPTX1A8MV57 137 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 HYPMO75409 117 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 CD74P04233 296 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 GLIPR1P48060 266 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 RNASEKQ6P5S7 137 aaKnown RBP12.84□□□□□ -0.35
LIMS2-213ENST00000469300 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
LIMS2-213ENST00000469300 PSG7Q13046 419 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 LEMD1Q68G75 181 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 FA2HQ7L5A8 372 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 SMDT1Q9H4I9 107 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 TNFSF18Q9UNG2 199 aa12.84□□□□□ -0.35
LIMS2-213ENST00000469300 C17orf100A8MU93 164 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 ADAM11O75078 769 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 LYPD3O95274 346 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 ERVS71-1P61550 626 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 FGFRL1Q8N441 504 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.35
LIMS2-213ENST00000469300 TBX15Q96SF7 602 aa12.83□□□□□ -0.35
LIMS2-213ENST00000469300 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.35
LIMS2-213ENST00000469300 A0A1W2PS18 150 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 A6NDN8 102 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 DCAF16Q9NXF7 216 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 ZNHIT1O43257 154 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 OR2A4O95047 310 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 TBR1Q16650 682 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 OR2A7Q96R45 310 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 PDE6DO43924 150 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 NHLH1Q02575 133 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
LIMS2-213ENST00000469300 TRAV30A0A087WSZ9 112 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 DCAF12L2Q5VW00 463 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-213ENST00000469300 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 PI4KAP42356 2102 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 H3BQ15 152 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 VSIG10L2P0DP72 767 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM204Q9BSN7 226 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 CHODLQ9H9P2 273 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 CEACAM18A8MTB9 384 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 ZNF253O75346 499 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 PLXNA3P51805 1871 aa12.82□□□□□ -0.36
LIMS2-213ENST00000469300 IGSF23A1L1A6 192 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 P2RY4P51582 365 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 LOXL3P58215 753 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 OR2D3Q8NGH3 330 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 A0A1B0GTI1 187 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 KBTBD11O94819 623 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 MELTFP08582 738 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 CDX1P47902 265 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-213ENST00000469300 TAS2R60P59551 318 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 P2RX4Q99571 388 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 GSN-AS1Q9NRJ2 163 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 TMEM140Q9NV12 185 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 FUT9Q9Y231 359 aa12.81□□□□□ -0.36
LIMS2-213ENST00000469300 ROS1P08922 2347 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms