RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PMCHP20382 165 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 KITLGP21583 273 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 SSBP1Q04837 148 aaKnown RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 SPATA46Q5T0L3 261 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 RAB1CQ92928 201 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 FAM3DQ96BQ1 224 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 BOKQ9UMX3 212 aaPredicted RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 A0A1W2PPV4 95 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 HRASP01112 189 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 H2BFMP0C1H6 154 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 RBMXP38159 391 aaKnown RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 ZNF141Q15928 474 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 COX19Q49B96 90 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 H1FNTQ75WM6 255 aaPredicted RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 AAED1Q7RTV5 226 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 MUC15Q8N387 334 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 NFAM1Q8NET5 270 aaPredicted RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 TSPAN32Q96QS1 320 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
NUP50-214ENST00000469163 NPVFQ9HCQ7 196 aa8.49□□□□□ -1.05
NUP50-214ENST00000469163 ABCA12Q86UK0 2595 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 IGKV1D-42A0A075B6H8 117 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 ZNF850A8MQ14 1090 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 RER1O15258 196 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 TSPAN13O95857 204 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 LYL1P12980 280 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 TMPRSS3P57727 454 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 TCTEX1D4Q5JR98 221 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 TRAPPC6BQ86SZ2 158 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 PNKDQ8N490 385 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 OR10D3Q8NH80 312 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 TRAV8-7A0A075B6U6 113 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 A0A0J9YW62 118 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 H3BMH7 237 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 MRPL33O75394 65 aaKnown RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 CRISP2P16562 243 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 FAM90A2PQ658T7 463 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 INO80CQ6PI98 192 aaPredicted RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 SPSB3Q6PJ21 355 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 CCDC71LQ8N9Z2 235 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 RAB1BQ9H0U4 201 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 SERTAD4Q9NUC0 356 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 PRSS50Q9UI38 385 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 HHLA2Q9UM44 414 aa8.48□□□□□ -1.05
NUP50-214ENST00000469163 USP9YO00507 2555 aaPredicted RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 ANKHD1Q8IWZ3 2542 aaKnown RBP8.48□□□□□ -1.05
NUP50-214ENST00000469163 CEBPZOSA8MTT3 80 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR11H12B2RN74 326 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 SDCBPO00560 298 aaPredicted RBP8.47□□□□□ -1.05
NUP50-214ENST00000469163 FAM78BQ5VT40 261 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 POC1AQ8NBT0 407 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 NPEPL1Q8NDH3 523 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR11H1Q8NG94 326 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR11H2Q8NH07 326 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR5B3Q8NH48 314 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 ZNF837Q96EG3 531 aaPredicted RBP8.47□□□□□ -1.05
NUP50-214ENST00000469163 DLL3Q9NYJ7 618 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 FZR1Q9UM11 496 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 K7EM74 188 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 MSTNO14793 375 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OPRM1P35372 400 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 CFHR2P36980 270 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 RTN4IP1Q8WWV3 396 aaPredicted RBP8.47□□□□□ -1.05
NUP50-214ENST00000469163 RNF183Q96D59 192 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 TAAR6Q96RI8 345 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 CHCHD2Q9Y6H1 151 aaPredicted RBP8.47□□□□□ -1.05
NUP50-214ENST00000469163 KIAA1549Q9HCM3 1950 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 KIAA2026Q5HYC2 2103 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 TEX48A0A1B0GUV7 120 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 DPRXA6NFQ7 191 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 LY6DQ14210 128 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 Q499Y3 187 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 TCF23Q7RTU1 214 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR10V1Q8NGI7 309 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 OR52N5Q8NH56 324 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 CLDND2Q8NHS1 167 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 AMELYQ99218 206 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 RNF114Q9Y508 228 aa8.47□□□□□ -1.05
NUP50-214ENST00000469163 P2RY10O00398 339 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 EFNA2O43921 213 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 RAD51DO75771 328 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 LYZL6O75951 148 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 SFT2D2O95562 160 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 ADH4P08319 380 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 NKX2-1P43699 371 aaPredicted RBP8.46□□□□□ -1.05
NUP50-214ENST00000469163 MRPS34P82930 218 aaKnown RBP8.46□□□□□ -1.05
NUP50-214ENST00000469163 EIF3IQ13347 325 aaKnown RBP8.46□□□□□ -1.05
NUP50-214ENST00000469163 CD300EQ496F6 205 aaPredicted RBP8.46□□□□□ -1.05
NUP50-214ENST00000469163 FAM57BQ71RH2 274 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 PERPQ96FX8 193 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 IMMP1LQ96LU5 166 aa8.46□□□□□ -1.05
NUP50-214ENST00000469163 PYGO2Q9BRQ0 406 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms