RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TMEM128Q5BJH2 165 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 COA6Q5JTJ3 125 aaKnown RBP10.49□□□□□ -0.73
USP11-206ENST00000469080 FAM166AQ6J272 317 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 ZNF695Q8IW36 515 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
USP11-206ENST00000469080 FAM103A1Q9BTL3 118 aaKnown RBP10.49□□□□□ -0.73
USP11-206ENST00000469080 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 ZFP92A6NM28 416 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 FKBP2P26885 142 aaKnown RBP10.49□□□□□ -0.73
USP11-206ENST00000469080 S100GP29377 79 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 LHX2P50458 406 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 TAS2R46P59540 309 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 SPINK9Q5DT21 86 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 RAB18Q9NP72 206 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 GNG13Q9P2W3 67 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 WIPI2Q9Y4P8 454 aa10.49□□□□□ -0.73
USP11-206ENST00000469080 B4DEV8 164 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 NUPR1O60356 82 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 TAS2R31P59538 309 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 SSBP1Q04837 148 aaKnown RBP10.48□□□□□ -0.73
USP11-206ENST00000469080 PRSS57Q6UWY2 283 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 CMTM2Q8TAZ6 248 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 TMEM54Q969K7 222 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 ACOT6Q3I5F7 207 aaPredicted RBP10.48□□□□□ -0.73
USP11-206ENST00000469080 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 TMEM170AQ8WVE7 144 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 H7BYZ3 331 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 CORTO00230 105 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 AADACP22760 399 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
USP11-206ENST00000469080 CEACAM3P40198 252 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 CLDN18P56856 261 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 TGFBR3Q03167 851 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 PRAMEF6Q5VXH4 476 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 OR10V1Q8NGI7 309 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 RPS4Y2Q8TD47 263 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 SPRR3Q9UBC9 169 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 ANXA10Q9UJ72 324 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 NOTCH2Q04721 2471 aa10.48□□□□□ -0.73
USP11-206ENST00000469080 WNT9BO14905 357 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 MMP23AO75900 390 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 GALR1P47211 349 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 ICAM4Q14773 271 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 FAM53AQ6NSI3 398 aaPredicted RBP10.47□□□□□ -0.73
USP11-206ENST00000469080 C16orf82Q7Z2V1 217 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 STARD4Q96DR4 205 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 M0R1B8 84 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 DEGS1O15121 323 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 MT-CO2P00403 227 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 FUT6P51993 359 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 RND2P52198 227 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 EDDM3BP56851 147 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 FOXF2Q12947 444 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 HINT2Q9BX68 163 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
USP11-206ENST00000469080 CSPG4Q6UVK1 2322 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 IGLV3-32A0A0A0MS00 114 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 DKK1O94907 266 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 SFT2D2O95562 160 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 CRYBA4P53673 196 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 SELENOVP59797 346 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 KRTCAP3Q53RY4 240 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 SMDT1Q9H4I9 107 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 NECAP2Q9NVZ3 263 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 ERRFI1Q9UJM3 462 aaPredicted RBP10.46□□□□□ -0.73
USP11-206ENST00000469080 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 GAGE12BA1L429 117 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 C10orf128Q5T292 105 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 LHFPL2Q6ZUX7 228 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 RPRMLQ8N4K4 120 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 POC1AQ8NBT0 407 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 SLC25A40Q8TBP6 338 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 MRGPRFQ96AM1 343 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 ATP5SQ99766 215 aa10.46□□□□□ -0.73
USP11-206ENST00000469080 SMG1Q96Q15 3661 aaKnown RBP10.46□□□□□ -0.74
USP11-206ENST00000469080 TOX4O94842 621 aa10.46□□□□□ -0.74
USP11-206ENST00000469080 RBPJQ06330 500 aa10.46□□□□□ -0.74
USP11-206ENST00000469080 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.74
USP11-206ENST00000469080 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.74
USP11-206ENST00000469080 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.74
USP11-206ENST00000469080 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.74
USP11-206ENST00000469080 TNCP24821 2201 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 C21orf140B9A014 251 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 SPRY3O43610 288 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 SSSCA1O60232 199 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 IAPPP10997 89 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 GFRA1P56159 465 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 TPPP2P59282 170 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 Q6ZWC4 215 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms