RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM90A24PP0C7X0 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 HLA-DOBP13765 273 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 BLVRBP30043 206 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 DRD3P35462 400 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CDKN1AP38936 164 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 P2RY2P41231 377 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 DAP3P51398 398 aaKnown RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM50BP56557 158 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TCTAP57738 103 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 SGCBQ16585 318 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 RTL8BQ17RB0 113 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 KIF26BQ2KJY2 2108 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CCDC144NLQ6NUI1 221 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 SLC25A47Q6Q0C1 308 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 Q6ZSR6 202 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 UEVLDQ8IX04 471 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 OR8I2Q8N0Y5 310 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 OR2Z1Q8NG97 314 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 OR4X2Q8NGF9 303 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 OR4A16Q8NH70 328 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 C18orf32Q8TCD1 76 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF418Q8TF45 676 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM171Q8WVE6 324 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 NEUROG1Q92886 237 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CHCHD1Q96BP2 118 aaKnown RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ARHGAP5-AS1Q96IT6 56 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM70Q9BUB7 260 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 QTRT1Q9BXR0 403 aaKnown RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 NPFFR1Q9GZQ6 430 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 STARD5Q9NSY2 213 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 WSB2Q9NYS7 404 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TAAR3PQ9P1P4 343 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 IGLV1-36A0A0B4J1U3 117 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM202A6NGA9 273 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 IGLON5A6NGN9 336 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 PRSS29PA6NIE9 313 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 CD300LBA8K4G0 201 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 A8MZ25 164 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 C11orf94C9JXX5 98 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 H0Y980 276 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 IFNL4K9M1U5 179 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 SOCS1O15524 211 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 ANGPTL7O43827 346 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 CHST1O43916 411 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 HSBP1O75506 76 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 NTN1O95631 604 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GPR75O95800 540 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 BGLAPP02818 100 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 LIPFP07098 398 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GRPP07492 148 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 PSG2P11465 335 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 IL12BP29460 328 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 S100A7P31151 101 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GPR183P32249 361 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 DUSP3P51452 185 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GRB2P62993 217 aaKnown RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 CX3CL1P78423 397 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 RPL18Q07020 188 aaKnown RBP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GABRA6Q16445 453 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 POU2AF1Q16633 256 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 MPV17L2Q567V2 206 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 NMSQ5H8A3 153 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF766Q5HY98 468 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 Q5PR19 223 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 PRR31Q5SQ13 230 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TIMM23BQ5SRD1 257 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OLIG3Q7RTU3 272 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 HSD11B1LQ7Z5J1 315 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 HMGN2P46Q86SG4 172 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TTC9CQ8N5M4 171 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 KLHDC9Q8NEP7 349 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OR10G7Q8NGN6 311 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OR10AG1Q8NH19 301 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 C8orf46Q8TAG6 207 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 SSC4DQ8WTU2 575 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM190Q8WZ59 177 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TAF15Q92804 592 aaKnown RBP eCLIP4.1□□□□□ -1.75
SF3B1-207ENST00000468925 GPR82Q96P67 336 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OR6C1Q96RD1 312 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM147Q9BVK8 224 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 VN1R3Q9BXE9 311 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 PBOV1Q9GZY1 135 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OR2D2Q9H210 308 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 KCNK15Q9H427 330 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 LANCL2Q9NS86 450 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 MED29Q9NX70 200 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 HSPB8Q9UJY1 196 aa4.1□□□□□ -1.75
SF3B1-207ENST00000468925 TP53TG3Q9ULZ0 132 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms