RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ACY3Q96HD9 319 aa-0.79□□□□□ -2.54
SSB-208ENST00000468600 IMMP2LQ96T52 175 aa-0.79□□□□□ -2.54
SSB-208ENST00000468600 MYCBPQ99417 103 aaPredicted RBP-0.79□□□□□ -2.54
SSB-208ENST00000468600 TTTY13Q9BZ97 58 aa-0.79□□□□□ -2.54
SSB-208ENST00000468600 OR5AC2Q9NZP5 309 aa-0.79□□□□□ -2.54
SSB-208ENST00000468600 POLR3HQ9Y535 204 aaPredicted RBP-0.79□□□□□ -2.54
SSB-208ENST00000468600 A0A087WUU8 490 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 TRAV38-1A0A0B4J264 116 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 A0A0D9SG42 100 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 hCG_2039718K7EN88 272 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 ATP8B1O43520 1251 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 GSTZ1O43708 216 aaPredicted RBP-0.8□□□□□ -2.54
SSB-208ENST00000468600 SC5DO75845 299 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 OR10J1P30954 320 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 DYNLL1P63167 89 aaKnown RBP-0.8□□□□□ -2.54
SSB-208ENST00000468600 ACSM3Q53FZ2 586 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 OR8B3Q8NGG8 313 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 BDP1A6H8Y1 2624 aa-0.8□□□□□ -2.54
SSB-208ENST00000468600 KDELR3O43731 214 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 CREBL2O60519 120 aaPredicted RBP-0.81□□□□□ -2.54
SSB-208ENST00000468600 CRYGCP07315 174 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 CA7P43166 264 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 RPL28P46779 137 aaKnown RBP-0.81□□□□□ -2.54
SSB-208ENST00000468600 FXYD7P58549 80 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 PID1Q7Z2X4 250 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 TMCO2Q7Z6W1 182 aaPredicted RBP-0.81□□□□□ -2.54
SSB-208ENST00000468600 RPP25LQ8N5L8 163 aaKnown RBP-0.81□□□□□ -2.54
SSB-208ENST00000468600 MRAP2Q96G30 205 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 SFRP2Q96HF1 295 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 FBXO44Q9H4M3 255 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 TMBIM4Q9HC24 238 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 STMN3Q9NZ72 180 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 SNX10Q9Y5X0 201 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 PEAK1Q9H792 1746 aa-0.81□□□□□ -2.54
SSB-208ENST00000468600 OTOGQ6ZRI0 2925 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 ADGRB2O60241 1585 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 STRCQ7RTU9 1775 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 TRAV14DV4A0A0A6YYC5 116 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 A0A1W2PPV4 95 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 STAG3L3P0CL85 134 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 AQP5P55064 265 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 BTN3A2P78410 334 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 TMEM267Q0VDI3 215 aaPredicted RBP-0.82□□□□□ -2.54
SSB-208ENST00000468600 DHFR2Q86XF0 187 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 OR13C8Q8NGS7 320 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 TNFAIP8L1Q8WVP5 186 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 RNASE6Q93091 150 aaKnown RBP-0.82□□□□□ -2.54
SSB-208ENST00000468600 RP1P56715 2156 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 CELSR1Q9NYQ6 3014 aa-0.82□□□□□ -2.54
SSB-208ENST00000468600 ABCA2Q9BZC7 2435 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 ALPK3Q96L96 1907 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 DICER1Q9UPY3 1922 aaKnown RBP-0.83□□□□□ -2.54
SSB-208ENST00000468600 GOLGA8IPA6NC78 632 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 TMEM212A6NML5 194 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 M0R2N4 97 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 GPR171O14626 319 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 SPINK7P58062 85 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 RAB14P61106 215 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 AP1S1P61966 158 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 HSP90AA4PQ58FG1 418 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 GDF5OSQ5U4N7 250 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 Q8N814 137 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 OR5P2Q8WZ92 322 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 YIPF3Q9GZM5 350 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 GAL3ST2Q9H3Q3 398 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 MED12Q93074 2177 aa-0.83□□□□□ -2.54
SSB-208ENST00000468600 ZNF106Q9H2Y7 1883 aaKnown RBP-0.84□□□□□ -2.54
SSB-208ENST00000468600 COL4A5P29400 1685 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 SIPA1L1O43166 1804 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 GSTTP1A0A1W2PQM5 241 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 H3BT86 120 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 SDCBPO00560 298 aaPredicted RBP-0.84□□□□□ -2.54
SSB-208ENST00000468600 SHBGP04278 402 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 UBBP0CG47 229 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 DEKP35659 375 aaKnown RBP-0.84□□□□□ -2.54
SSB-208ENST00000468600 TBPL1P62380 186 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 C9orf64Q5T6V5 341 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 OR4A15Q8NGL6 344 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 ABCC12Q96J65 1359 aa-0.84□□□□□ -2.54
SSB-208ENST00000468600 ASH1LQ9NR48 2969 aaKnown RBP-0.84□□□□□ -2.54
SSB-208ENST00000468600 IRGMA1A4Y4 181 aa-0.85□□□□□ -2.55
SSB-208ENST00000468600 EFCAB9A8MZ26 197 aa-0.85□□□□□ -2.55
SSB-208ENST00000468600 NUP160Q12769 1436 aa-0.85□□□□□ -2.55
SSB-208ENST00000468600 FAM27BQ5VT28 67 aa-0.85□□□□□ -2.55
SSB-208ENST00000468600 TTC33Q6PID6 262 aaPredicted RBP-0.85□□□□□ -2.55
SSB-208ENST00000468600 TESCQ96BS2 214 aa-0.85□□□□□ -2.55
SSB-208ENST00000468600 WNK2Q9Y3S1 2297 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 CHD5Q8TDI0 1954 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 NPATQ14207 1427 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 H0YC42 278 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 TRAPPC2LH3BP13 241 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 MBP02144 154 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 PPBPP02775 128 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 SNAP25P60880 206 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 VSNL1P62760 191 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 HERVK_113P63121 156 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 AKR1C1Q04828 323 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 TMEM249Q2WGJ8 235 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 SSX6Q7RTT6 188 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 MRPL52Q86TS9 123 aaKnown RBP-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms