RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 PKIBQ9C010 78 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 JPT1Q9UK76 154 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 ZNF729A6NN14 1252 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 IGLV3-19P01714 112 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 C1QCP02747 245 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 MMP16P51512 607 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 SCN5AQ14524 2016 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 ODAMA1E959 279 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 CEACAM4O75871 244 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 DNAL4O96015 105 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 IGKV1D-16P01601 117 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 CDCP2Q5VXM1 449 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 SIGIRRQ6IA17 410 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 REC114Q7Z4M0 266 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 FAM168AQ92567 244 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 AQP10Q96PS8 301 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 JMJD8Q96S16 334 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 GON4LQ3T8J9 2241 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 PSMB11A5LHX3 300 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 ISG15P05161 165 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 COX6A1P12074 109 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 LCN2P80188 198 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 SERF2P84101 59 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 OR4C13Q8NGP0 309 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 DUX3Q96PT4 197 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 PAM16Q9Y3D7 125 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 TSPAN2O60636 221 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 SCTP09683 121 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 SEC11BP0C7V7 166 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 VSIG10L2P0DP72 767 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 TMEM177Q53S58 311 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 PAPPA-AS1Q5QFB9 102 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 PEMTQ9UBM1 199 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 PILRAQ9UKJ1 303 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 BCL2P10415 239 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 KLF14Q8TD94 323 aaPredicted RBP7.47□□□□□ -1.21
HPS4-209ENST00000466781 NEU4Q8WWR8 484 aaPredicted RBP7.47□□□□□ -1.21
HPS4-209ENST00000466781 TMEM45BQ96B21 275 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 ST6GAL2Q96JF0 529 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 NEU1Q99519 415 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 TNFSF18Q9UNG2 199 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
HPS4-209ENST00000466781 A0A087X0M5 115 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 A0A1B0GX30 115 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 H7C1H1 209 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 ASAH2BP0C7U1 165 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 SCARF2Q96GP6 870 aaPredicted RBP7.46□□□□□ -1.21
HPS4-209ENST00000466781 KLHDC2Q9Y2U9 406 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.21
HPS4-209ENST00000466781 PTP4A3O75365 173 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.21
HPS4-209ENST00000466781 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 LEAP2Q969E1 77 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.21
HPS4-209ENST00000466781 IGKV1-8A0A0C4DH67 115 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A10PA6NDY2 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A18PA6NE21 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A16PA6NEW6 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A20PA6NIJ5 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A8PA6NJQ4 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A7PA6NKC0 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A22PA8MWA6 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A12PA8MX19 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A5PA8MXJ8 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A23PA8MXZ1 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 IGF2P01344 180 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3-23P01764 117 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A15PP0C7V4 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A13PP0C7W8 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A14PP0C7W9 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A24PP0C7X0 464 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 C10orf128Q5T292 105 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 KLK15Q9H2R5 256 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 DNAJC4Q9NNZ3 241 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 CROCCQ5TZA2 2017 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 C9JCJ5 164 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
HPS4-209ENST00000466781 NDUFB4O95168 129 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 EFNB2P52799 333 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 COTL1Q14019 142 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 ACSF3Q4G176 576 aaPredicted RBP7.46□□□□□ -1.22
HPS4-209ENST00000466781 MIC13Q5XKP0 118 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 ZNF383Q8NA42 475 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 ZPLD1Q8TCW7 415 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 SRSF12Q8WXF0 261 aaKnown RBP7.46□□□□□ -1.22
HPS4-209ENST00000466781 MT-ND6P03923 174 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 VDAC2P45880 294 aaPredicted RBP7.46□□□□□ -1.22
HPS4-209ENST00000466781 SLC25A47Q6Q0C1 308 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 PQLC2Q6ZP29 291 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 DOCK3Q8IZD9 2030 aa7.46□□□□□ -1.22
HPS4-209ENST00000466781 A0A0G2JLM5 398 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 CENPVL1A0A0U1RR11 272 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 C7orf77A4D0Y5 90 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 FOXI3A8MTJ6 420 aaPredicted RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 FABP2P12104 132 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 COL5A1-AS1Q5SY13 56 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms