RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 CHPT1Q8WUD6 406 aa9.49□□□□□ -0.89
SHROOM3-202ENST00000466541 TRRAPQ9Y4A5 3859 aa9.49□□□□□ -0.89
SHROOM3-202ENST00000466541 IGHV7-81A0A0B4J1V7 117 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 DPPA5A6NC42 116 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 G3V318 75 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 ATP6V0E1O15342 81 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 NDUFA3O95167 84 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 CNIH1O95406 144 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 CD3DP04234 171 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 VDAC1P21796 283 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 S100A5P33763 92 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 PJVKQ0ZLH3 352 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 C2orf68Q2NKX9 166 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 PHLDA2Q53GA4 152 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 DHRS11Q6UWP2 260 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 GRPEL2Q8TAA5 225 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 C15orf40Q8WUR7 153 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 DDB2Q92466 427 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 RNF5Q99942 180 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 FAM103A1Q9BTL3 118 aaKnown RBP9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 TINAGL1Q9GZM7 467 aaPredicted RBP9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 OR51J1Q9H342 316 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 WNK1Q9H4A3 2382 aa9.48□□□□□ -0.89
SHROOM3-202ENST00000466541 GABARAPH6UMI1 98 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 CA2P00918 260 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 HLA-DRB1P01911 266 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 LGALS7P47929 136 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 CX3CL1P78423 397 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 TMEM177Q53S58 311 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 PYDC2Q56P42 97 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 RNASE10Q5GAN6 216 aaKnown RBP9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 AADACL3Q5VUY0 350 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 ZNF660Q6AZW8 331 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 PYHIN1Q6K0P9 492 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 TREML4Q6UXN2 200 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 WIPF2Q8TF74 440 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 R3HDM4Q96D70 268 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 NXF2Q9GZY0 626 aaKnown RBP9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 FXYD6Q9H0Q3 95 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 MTFP1Q9UDX5 166 aa9.47□□□□□ -0.89
SHROOM3-202ENST00000466541 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 NUDT19A8MXV4 375 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 RAMP3O60896 148 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 SPDEFO95238 335 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 IGLV2-23P01705 113 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 RLN1P04808 185 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 PGAM2P15259 253 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 GNRHRP30968 328 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 NDPQ00604 133 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 CD83Q01151 205 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 EIF4EBP1Q13541 118 aaPredicted RBP9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 FXYD3Q14802 87 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 SCGB2B2Q4G0G5 96 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 ACTBL2Q562R1 376 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 PRR31Q5SQ13 230 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 TEX38Q6PEX7 206 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 ZNF66Q6ZN08 573 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 SSX9Q7RTT3 188 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 PPP1R27Q86WC6 154 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 NDUFA11Q86Y39 141 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 SPAG16Q8N0X2 631 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 OR4S2Q8NH73 311 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 CASTOR1Q8WTX7 329 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 DGCR14Q96DF8 476 aaKnown RBP9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 GON7Q9BXV9 100 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 MMP27Q9H306 513 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 FBXO7Q9Y3I1 522 aa9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.9
SHROOM3-202ENST00000466541 TPPPO94811 219 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 RAB3DO95716 219 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 OPN1MWP04001 364 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 APELAP0DMC3 54 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 OPN1MW2P0DN77 364 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 OPN1MW3P0DN78 364 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 PF4V1P10720 104 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 RPA2P15927 270 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 PPP5CP53041 499 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 BRWD1-AS2P59051 145 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 TAS2R19P59542 299 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 CATR1Q13166 79 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 UNQ5815/PRO19632Q6UWF5 114 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 CMTM1Q8IZ96 169 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 POC5Q8NA72 575 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms