RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 IL34Q6ZMJ4 242 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 MUC15Q8N387 334 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 TCTEX1D1Q8N7M0 179 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 CORO2AQ92828 525 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 TREM1Q9NP99 234 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 ZG16O60844 167 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 ATG12O94817 140 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 RAB7AP51149 207 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 TMEM200BQ69YZ2 307 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 ATRAIDQ6UW56 229 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 C1orf122Q6ZSJ8 110 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 FAM213BQ8TBF2 198 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 ZNF251Q9BRH9 671 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 QTRT1Q9BXR0 403 aaKnown RBP11.15□□□□□ -0.62
UBE4B-206ENST00000466379 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 NUP50Q9UKX7 468 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
UBE4B-206ENST00000466379 TMEM218A2RU14 115 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 FAM90A26D6RGX4 464 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 F2RL1P55085 397 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 DEFA5Q01523 94 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 CD300LFQ8TDQ1 290 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 S1PR3Q99500 378 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 RPUSD1Q9UJJ7 312 aaKnown RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 HCFC1P51610 2035 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 ANKHD1Q8IWZ3 2542 aaKnown RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 DOCK11Q5JSL3 2073 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 DVL1O14640 695 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 NDUFB3O43676 98 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 HPRT1P00492 218 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 LOXP28300 417 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-206ENST00000466379 OR8G2PQ6IF36 304 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 DDB2Q92466 427 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 OR4C12Q96R67 309 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 LAMP3Q9UQV4 416 aa11.14□□□□□ -0.63
UBE4B-206ENST00000466379 TRAV3A0A0B4J244 114 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 COL8A2P25067 703 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
UBE4B-206ENST00000466379 PRELID3BQ9Y3B1 194 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
UBE4B-206ENST00000466379 LRBAP50851 2863 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 CEBPZOSA8MTT3 80 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 NUDT19A8MXV4 375 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 ITGB1BP1O14713 200 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 TSPAN15O95858 294 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 TAS2R30P59541 319 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 TFF3Q07654 80 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 ZNF525Q8N782 197 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 ZNF383Q8NA42 475 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 FAM216AQ8WUB2 273 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 LRRC46Q96FV0 321 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 ZNF714Q96N38 554 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
UBE4B-206ENST00000466379 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 RALYQ9UKM9 306 aaKnown RBP11.12□□□□□ -0.63
UBE4B-206ENST00000466379 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 C9JQL5 133 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 DFFBO76075 338 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 IFNA5P01569 189 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 BTN1A1Q13410 526 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 HFEQ30201 348 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 LRRC10Q5BKY1 277 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 GAL3ST2Q9H3Q3 398 aa11.12□□□□□ -0.63
UBE4B-206ENST00000466379 STRAPQ9Y3F4 350 aaKnown RBP11.12□□□□□ -0.63
UBE4B-206ENST00000466379 LY6HO94772 140 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-206ENST00000466379 HNF4GQ14541 408 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
UBE4B-206ENST00000466379 UQCC1Q9NVA1 299 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 GAB2Q9UQC2 676 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 F8W036 122 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 RNASEK-C17orf49H0YIS7 233 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 F12P00748 615 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-206ENST00000466379 IFNA17P01571 189 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 THBS3P49746 956 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 RAB5CP51148 216 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 ERVK-16P61578 105 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 SLC38A11Q08AI6 406 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-206ENST00000466379 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
UBE4B-206ENST00000466379 ABCA4P78363 2273 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 UBE2L5PA0A1B0GUS4 154 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBE4B-206ENST00000466379 SFTPCP11686 197 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 NQO2P16083 231 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 SNCAP37840 140 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 HBG1P69891 147 aa11.1□□□□□ -0.63
UBE4B-206ENST00000466379 HBG2P69892 147 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms