RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 A0A087WUU8 490 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 TMSB15BA0A087X1C1 80 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 A0A1B0GVG6 124 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 ZNF705FA8MVS1 300 aaPredicted RBP1.32□□□□□ -2.2
LRCH3-211ENST00000466054 CXCL2P19875 107 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 CXCL3P19876 107 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 CTBP2P56545 445 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 TBPL1P62380 186 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 RPS24P62847 133 aaKnown RBP1.32□□□□□ -2.2
LRCH3-211ENST00000466054 GLO1Q04760 184 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 PLPPR5Q32ZL2 321 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 OR10K2Q6IF99 312 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 Q6ZSA8 131 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 COA5Q86WW8 74 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 TIPINQ9BVW5 301 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 MS4A6AQ9H2W1 248 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 HES4Q9HCC6 221 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 TAAR3PQ9P1P4 343 aa1.32□□□□□ -2.2
LRCH3-211ENST00000466054 REREQ9P2R6 1566 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 A0A1B0GW54 56 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 FABP12A6NFH5 140 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 TXNDC9O14530 226 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 ATP8B1O43520 1251 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 NAPSAO96009 420 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 IL6P05231 212 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 BPGMP07738 259 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 EMP2P54851 167 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 FKBP1AP62942 108 aaKnown RBP1.31□□□□□ -2.2
LRCH3-211ENST00000466054 HLA-DRB3P79483 266 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 SMIM19Q96E16 107 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 DHRS9Q9BPW9 319 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 NAA38Q9BRA0 125 aaKnown RBP1.31□□□□□ -2.2
LRCH3-211ENST00000466054 POLR3HQ9Y535 204 aaPredicted RBP1.31□□□□□ -2.2
LRCH3-211ENST00000466054 NAV1Q8NEY1 1877 aa1.31□□□□□ -2.2
LRCH3-211ENST00000466054 FN1P02751 2386 aaKnown RBP1.3□□□□□ -2.2
LRCH3-211ENST00000466054 TINCRA0A1B0GVN0 87 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 RFPL4AA6NLU0 287 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 C9JCJ5 164 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 RFPL4AL1F8VTS6 287 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 DDTP30046 118 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 FXYD7P58549 80 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 TMEM258P61165 79 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 ZNF791Q3KP31 576 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-211ENST00000466054 PLEKHG7Q6ZR37 379 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 FUNDC1Q8IVP5 155 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 OR8B12Q8NGG6 310 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 OR13C8Q8NGS7 320 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 RNASE6Q93091 150 aaKnown RBP1.3□□□□□ -2.2
LRCH3-211ENST00000466054 C12orf43Q96C57 262 aaKnown RBP1.3□□□□□ -2.2
LRCH3-211ENST00000466054 ZNF514Q96K75 400 aaPredicted RBP1.3□□□□□ -2.2
LRCH3-211ENST00000466054 SPZ1Q9BXG8 430 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 C8orf4Q9NR00 106 aa1.3□□□□□ -2.2
LRCH3-211ENST00000466054 WDR90Q96KV7 1748 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 IFNGR2P38484 337 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 CDK9P50750 372 aaKnown RBP1.29□□□□□ -2.2
LRCH3-211ENST00000466054 TAS2R20P59543 309 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 CXCR4P61073 352 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 MIAQ16674 131 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 TMEM42Q69YG0 159 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 LYZL1Q6UWQ5 148 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 LRRC28Q86X40 367 aaPredicted RBP1.29□□□□□ -2.2
LRCH3-211ENST00000466054 RNF133Q8WVZ7 376 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 ANKRD36BP1Q96IX9 119 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 C7orf50Q9BRJ6 194 aaKnown RBP1.29□□□□□ -2.2
LRCH3-211ENST00000466054 TMEM109Q9BVC6 243 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 MRPL32Q9BYC8 188 aaKnown RBP1.29□□□□□ -2.2
LRCH3-211ENST00000466054 EURLQ9NYK6 297 aa1.29□□□□□ -2.2
LRCH3-211ENST00000466054 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
LRCH3-211ENST00000466054 BIRC5O15392 142 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 C1QCP02747 245 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
LRCH3-211ENST00000466054 HLA-DQB2P05538 268 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 EMP1P54849 157 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 GPHB5Q86YW7 130 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 Q8N402 240 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 JOSD2Q8TAC2 188 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 ZNF675Q8TD23 568 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 ASB17Q8WXJ9 295 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 SLC7A6Q92536 515 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 DOHHQ9BU89 302 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 DERL2Q9GZP9 239 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 CYSTM1Q9H1C7 97 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 CFAP45Q9UL16 551 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 SIPA1L1O43166 1804 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 TENM1Q9UKZ4 2725 aa1.28□□□□□ -2.2
LRCH3-211ENST00000466054 NUP160Q12769 1436 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 ABCC12Q96J65 1359 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 MEIKINA0A087WXM9 373 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 TMED7-TICAM2A0A0A6YYA0 188 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 LINC00854A0A1B0GVQ3 168 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 A8MUN3 132 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 F8W036 122 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 KLRC4O43908 158 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 APOMO95445 188 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 ZNF705DP0CH99 300 aaPredicted RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 ZNF705BP0CI00 300 aaPredicted RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 UGT2B7P16662 529 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 PSMB8P28062 276 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 MAGEA12P43365 314 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms