RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 Q8N7P7 452 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 OR13D1Q8NGV5 346 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 C18orf12Q96KH6 178 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 S1PR3Q99500 378 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 FOXC2Q99958 501 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 SEC22CQ9BRL7 303 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 PCGF1Q9BSM1 259 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 ABHD14AQ9BUJ0 271 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TMEM222Q9H0R3 208 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TMEM133Q9H2Q1 129 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 IFI27L2Q9H2X8 130 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 METTL8Q9H825 291 aaKnown RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 SDHAF2Q9NX18 166 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 INSIG2Q9Y5U4 225 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 UBR5O95071 2799 aaPredicted RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 YLPM1P49750 1951 aaKnown RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 IGHV4-30-2A0A087WSY4 118 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IGHV2-26A0A0B4J1V2 119 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IGHV3-43A0A0B4J1X8 118 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ZNF785A8K8V0 405 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 B4DSR2 109 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 LY6LH3BQJ8 138 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 HSD17B6O14756 317 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 TXNL1O43396 289 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 PFDN1O60925 122 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ATG12O94817 140 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IL6RP08887 468 aaPredicted RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 FGF2P09038 288 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 GIPP09681 153 aaPredicted RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 OR5AC1P0C628 307 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IGHV3-43DP0DP04 118 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 PF4V1P10720 104 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 OMGP23515 440 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IL3RAP26951 378 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 MC5RP33032 325 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 GPR12P47775 334 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 BPIFB3P59826 476 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ZNF816Q0VGE8 651 aaPredicted RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 BAMBIQ13145 260 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 CBX3Q13185 183 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 IL15RAQ13261 267 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 GNMTQ14749 295 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 FCN2Q15485 313 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 CARTPTQ16568 116 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 HLA-DRB5Q30154 266 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 MINOS1Q5TGZ0 78 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 NCR3LG1Q68D85 454 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 LIN54Q6MZP7 749 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 BTNL3Q6UXE8 466 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 FAM219AQ8IW50 185 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 OR11H7Q8NGC8 314 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 OR52B4Q8NGK2 314 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 DDB2Q92466 427 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 LSM10Q969L4 123 aaKnown RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 PERPQ96FX8 193 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ABHD14BQ96IU4 210 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ST6GAL2Q96JF0 529 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 C2orf50Q96LR7 162 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 RNF5Q99942 180 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 BEX2Q9BXY8 128 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 NMES1Q9C002 83 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 PARP12Q9H0J9 701 aaKnown RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 PLEKHA2Q9HB19 425 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 ZFP57Q9NU63 452 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 LIN7CQ9NUP9 197 aaKnown RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 CACFD1Q9UGQ2 172 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 TBL2Q9Y4P3 447 aaKnown RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 AMMECR1Q9Y4X0 333 aaPredicted RBP4.44□□□□□ -1.7
VPS41-211ENST00000466017 MINOS1-NBL1R4GNA1 71 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 DOPEY2Q9Y3R5 2298 aa4.44□□□□□ -1.7
VPS41-211ENST00000466017 A0A1B0GU03 582 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 FAM90A9PA6NNJ1 464 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 ODF3BA8MYP8 253 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 FAM157AC9JC47 383 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 BUB1B-PAK6H3BSN5 160 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 J3QLI3 93 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 TOR1AO14656 332 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 SLC31A2O15432 143 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 PHF1O43189 567 aaPredicted RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 SSNA1O43805 119 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 CCNKO75909 580 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 HPRT1P00492 218 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 IFNA21P01568 189 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 GAPDHP04406 335 aaKnown RBP4.43□□□□□ -1.7
VPS41-211ENST00000466017 MSMBP08118 114 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 CT45A6P0DMU7 189 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 CT45A5P0DMU8 189 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 CT45A7P0DMV0 189 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 NFYBP25208 207 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 UBE2E1P51965 193 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 BRWD1-AS2P59051 145 aa4.43□□□□□ -1.7
VPS41-211ENST00000466017 ARF6P62330 175 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms