RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 HARBI1Q96MB7 349 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 NOL4LQ96MY1 436 aaPredicted RBP16.02■□□□□ 0.16
SKA3-205ENST00000465471 TAS2R8Q9NYW2 309 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 TET2Q6N021 2002 aaPredicted RBP16.02■□□□□ 0.15
SKA3-205ENST00000465471 FABP12A6NFH5 140 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 SRRM4A7MD48 611 aaKnown RBP16.01■□□□□ 0.15
SKA3-205ENST00000465471 FBXO24O75426 580 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 CRYGBP07316 175 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 CD28P10747 220 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 TAS2R19P59542 299 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 CBX3Q13185 183 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 RNASE10Q5GAN6 216 aaKnown RBP16.01■□□□□ 0.15
SKA3-205ENST00000465471 C10orf99Q6UWK7 81 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 OR5AU1Q8NGC0 362 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 SGMS2Q8NHU3 365 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 BORCS5Q969J3 196 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 TINAGL1Q9GZM7 467 aaPredicted RBP16.01■□□□□ 0.15
SKA3-205ENST00000465471 PRELID3BQ9Y3B1 194 aa16.01■□□□□ 0.15
SKA3-205ENST00000465471 PLXNB1O43157 2135 aa16■□□□□ 0.15
SKA3-205ENST00000465471 FCGR3BO75015 233 aa16■□□□□ 0.15
SKA3-205ENST00000465471 CRYZL1O95825 349 aa16■□□□□ 0.15
SKA3-205ENST00000465471 S100A5P33763 92 aa16■□□□□ 0.15
SKA3-205ENST00000465471 TSPAN5P62079 268 aa16■□□□□ 0.15
SKA3-205ENST00000465471 NDPQ00604 133 aa16■□□□□ 0.15
SKA3-205ENST00000465471 TCTEX1D4Q5JR98 221 aa16■□□□□ 0.15
SKA3-205ENST00000465471 AADACL3Q5VUY0 350 aa16■□□□□ 0.15
SKA3-205ENST00000465471 CENPVQ7Z7K6 275 aaPredicted RBP16■□□□□ 0.15
SKA3-205ENST00000465471 LHFPL1Q86WI0 220 aa16■□□□□ 0.15
SKA3-205ENST00000465471 ARRDC1Q8N5I2 433 aa16■□□□□ 0.15
SKA3-205ENST00000465471 OSR1Q8TAX0 266 aaPredicted RBP16■□□□□ 0.15
SKA3-205ENST00000465471 TCTEX1D2Q8WW35 142 aa16■□□□□ 0.15
SKA3-205ENST00000465471 GPHA2Q96T91 129 aa16■□□□□ 0.15
SKA3-205ENST00000465471 OR51J1Q9H342 316 aa16■□□□□ 0.15
SKA3-205ENST00000465471 TPSG1Q9NRR2 321 aa16■□□□□ 0.15
SKA3-205ENST00000465471 METTL1Q9UBP6 276 aaKnown RBP16■□□□□ 0.15
SKA3-205ENST00000465471 LINC00527Q9UJ94 153 aa16■□□□□ 0.15
SKA3-205ENST00000465471 VWFP04275 2813 aa16■□□□□ 0.15
SKA3-205ENST00000465471 PSMB11A5LHX3 300 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 FCN1O00602 326 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 SHOXO15266 292 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 TNFSF12O43508 249 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 SLC25A17O43808 307 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 CSF1P09603 554 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 CRIP2P52943 208 aaPredicted RBP15.99■□□□□ 0.15
SKA3-205ENST00000465471 UCP3P55916 312 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 CD83Q01151 205 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 CFHR3Q02985 330 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 PRR31Q5SQ13 230 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 HIST2H2BDQ6DRA6 164 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 C11orf44Q8N8P7 122 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 OR4D10Q8NGI6 311 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 OR6Q1Q8NGQ2 317 aa15.99■□□□□ 0.15
SKA3-205ENST00000465471 ADARB2-AS1A8MUL3 147 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 RBFOX2O43251 390 aaKnown RBP eCLIP15.98■□□□□ 0.15
SKA3-205ENST00000465471 PTBP1P26599 531 aaKnown RBP eCLIP15.98■□□□□ 0.15
SKA3-205ENST00000465471 ETV6P41212 452 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 KIR2DS2P43631 304 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 UBE2KP61086 200 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 SSBP2P81877 361 aaPredicted RBP15.98■□□□□ 0.15
SKA3-205ENST00000465471 PLGLAQ15195 96 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 ZNF79Q15937 498 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 MRGPRG-AS1Q2M3A8 158 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 STEAP1BQ6NZ63 245 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 OR4S2Q8NH73 311 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 RSRP1Q9BUV0 290 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 PKD1L1Q8TDX9 2849 aa15.98■□□□□ 0.15
SKA3-205ENST00000465471 A6NHS1 94 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 ATP6V0E1O15342 81 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 ZNF735P0CB33 412 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 CX3CL1P78423 397 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 CATR1Q13166 79 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 C19orf54Q5BKX5 351 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 OR2B11Q5JQS5 317 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 ZNF562Q6V9R5 426 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 ZNF329Q86UD4 541 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 PPP1R27Q86WC6 154 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 CITED2Q99967 270 aaPredicted RBP15.97■□□□□ 0.15
SKA3-205ENST00000465471 FBXO7Q9Y3I1 522 aa15.97■□□□□ 0.15
SKA3-205ENST00000465471 CMYA5Q8N3K9 4069 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 ANKRD20A5PA0PJZ0 165 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 M0QZ24 198 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 GPR31O00270 319 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 PGLYRP1O75594 196 aaPredicted RBP15.96■□□□□ 0.15
SKA3-205ENST00000465471 RAB3DO95716 219 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 CA2P00918 260 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 IFNA6P05013 189 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 MEF2DQ14814 521 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 LPCAT3Q6P1A2 487 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 COMMD1Q8N668 190 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 TEX45Q8NA69 505 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 OR4X2Q8NGF9 303 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 TRIM63Q969Q1 353 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 GON7Q9BXV9 100 aa15.96■□□□□ 0.15
SKA3-205ENST00000465471 RAMP3O60896 148 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 EGR2P11161 476 aaPredicted RBP15.95■□□□□ 0.14
SKA3-205ENST00000465471 SLC35B1P78383 322 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 VMA21Q3ZAQ7 101 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 NDUFA11Q86Y39 141 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 CMTM1Q8IZ96 169 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms