RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C17orf50Q8WW18 174 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 NABP2Q9BQ15 211 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 ZNF251Q9BRH9 671 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 CCL28Q9NRJ3 127 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 COPZ2Q9P299 210 aa13.97□□□□□ -0.17
CPSF4-209ENST00000465132 FAM90A9PA6NNJ1 464 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 LYRM1O43325 122 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 TSPAN9O75954 239 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 ZNF735P0CB33 412 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 CT45A6P0DMU7 189 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 CT45A5P0DMU8 189 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 CT45A7P0DMV0 189 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 GNRHRP30968 328 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 DUTP33316 252 aaKnown RBP13.96□□□□□ -0.17
CPSF4-209ENST00000465132 RBMS2Q15434 407 aaKnown RBP13.96□□□□□ -0.17
CPSF4-209ENST00000465132 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 TCTEX1D2Q8WW35 142 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 MRPL20Q9BYC9 149 aaKnown RBP13.96□□□□□ -0.17
CPSF4-209ENST00000465132 PALMDQ9NP74 551 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 LIN7CQ9NUP9 197 aaKnown RBP13.96□□□□□ -0.17
CPSF4-209ENST00000465132 TCF19Q9Y242 345 aa13.96□□□□□ -0.17
CPSF4-209ENST00000465132 CTSDP07339 412 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-209ENST00000465132 TMEM11P17152 192 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 RND3P61587 244 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 EBI3Q14213 229 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 ZNF818PQ6ZRF7 136 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 C1QL4Q86Z23 238 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 OR4C13Q8NGP0 309 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 FAM110DQ8TAY7 271 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-209ENST00000465132 CFHR4Q92496 578 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 FLYWCH2Q96CP2 140 aaKnown RBP13.95□□□□□ -0.18
CPSF4-209ENST00000465132 FXYD6Q9H0Q3 95 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 FAM212BQ9NTI7 297 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-209ENST00000465132 SLC35D1Q9NTN3 355 aa13.95□□□□□ -0.18
CPSF4-209ENST00000465132 LINC00854A0A1B0GVQ3 168 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPSF4-209ENST00000465132 IGKV1D-33P01593 117 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 IGKV1-33P01594 117 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 SNRNP70P08621 437 aaKnown RBP13.94□□□□□ -0.18
CPSF4-209ENST00000465132 LGALS7P47929 136 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 ASAH1Q13510 395 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 DIAPH2-AS1Q14236 149 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 C2orf68Q2NKX9 166 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 FAAP20Q6NZ36 180 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 OR4S2Q8NH73 311 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 MARCH1Q8TCQ1 289 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 TSNAXQ99598 290 aaKnown RBP13.94□□□□□ -0.18
CPSF4-209ENST00000465132 KIAA1456Q9P272 454 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 KCNIP3Q9Y2W7 256 aa13.94□□□□□ -0.18
CPSF4-209ENST00000465132 H0YJW9 148 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 ATG12O94817 140 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 OR2F2O95006 317 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 TAS2R31P59538 309 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 OR13C8Q8NGS7 320 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 OSR1Q8TAX0 266 aaPredicted RBP13.93□□□□□ -0.18
CPSF4-209ENST00000465132 SLC2A9Q9NRM0 540 aa13.93□□□□□ -0.18
CPSF4-209ENST00000465132 FAM240BA0A1B0GVZ2 78 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 PGLYRP1O75594 196 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-209ENST00000465132 HRASP01112 189 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 IGLV2-14P01704 120 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 ANXA3P12429 323 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 PIGPP57054 158 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 SGPP2Q8IWX5 399 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 ZNF383Q8NA42 475 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 DRAXINQ8NBI3 349 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-209ENST00000465132 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-209ENST00000465132 RBM14Q96PK6 669 aaKnown RBP13.92□□□□□ -0.18
CPSF4-209ENST00000465132 NPFFR1Q9GZQ6 430 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 GPR132Q9UNW8 380 aa13.92□□□□□ -0.18
CPSF4-209ENST00000465132 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-209ENST00000465132 A6NDX4 124 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 MPPED1O15442 326 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 FGF16O43320 207 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 CREBL2O60519 120 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-209ENST00000465132 PROP1O75360 226 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 NDUFB6O95139 128 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 SPDEFO95238 335 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 RLN1P04808 185 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 RPA2P15927 270 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 F2RP25116 425 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 UBE2MP61081 183 aaKnown RBP13.91□□□□□ -0.18
CPSF4-209ENST00000465132 RPS16P62249 146 aaKnown RBP13.91□□□□□ -0.18
CPSF4-209ENST00000465132 PHLDA2Q53GA4 152 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 VSTM2AQ8TAG5 236 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 ENKURQ8TC29 256 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 SLC25A33Q9BSK2 321 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
CPSF4-209ENST00000465132 IGHV3-72A0A0B4J1Y9 119 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 SHOXO15266 292 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 TNFSF12O43508 249 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 FCGR3BO75015 233 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 HPRT1P00492 218 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 SERPINE2P07093 398 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 SRPXP78539 464 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-209ENST00000465132 LY6EQ16553 131 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 VMA21Q3ZAQ7 101 aa13.9□□□□□ -0.18
CPSF4-209ENST00000465132 TMEM177Q53S58 311 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms