RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FIP1L1Q6UN15 594 aaKnown RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HOGA1Q86XE5 327 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PDZD9Q8IXQ8 264 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 Q8N402 240 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF561Q8N587 486 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR10V1Q8NGI7 309 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR4C16Q8NGL9 310 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 C17orf50Q8WW18 174 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NEDD4LQ96PU5 975 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TBX15Q96SF7 602 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TSC22D3Q99576 134 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NUDT16L1Q9BRJ7 211 aaKnown RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CHIAQ9BZP6 476 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SEBOXQ9HB31 216 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 RHOFQ9HBH0 211 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TAF9BQ9HBM6 251 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SIRT7Q9NRC8 400 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NECAP2Q9NVZ3 263 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 MTFP1Q9UDX5 166 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 RPUSD1Q9UJJ7 312 aaKnown RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 POMT1Q9Y6A1 747 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TENM2Q9NT68 2774 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TRBV6-6A0A0A6YYG2 114 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A0A0A6YYH2 397 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 KIR2DS1A0A191URI9 304 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 MDFIC2A0A1B0GVS7 189 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A0A1W2PRD5 423 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A0A1W2PRF3 423 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A0A1W2PRM7 423 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ANKRD20A5PA0PJZ0 165 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TMEM30CPA0ZSE6 113 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A6NJ64 397 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SERPINE3A8MV23 424 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 GABARAPH6UMI1 98 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 BMPR1BO00238 502 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NDUFB3O43676 98 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CA11O75493 328 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 UPK1BO75841 260 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 RGS11O94810 467 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 FSTL3O95633 263 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HBZP02008 142 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 MMP9P14780 707 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NFYAP23511 347 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HRH1P35367 487 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PPP1CCP36873 323 aaKnown RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CCR6P51684 374 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PPP5CP53041 499 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HLA-DRB3P79483 266 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF846Q147U1 533 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PNLIPRP3Q17RR3 467 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SPANXN2Q5MJ10 180 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF660Q6AZW8 331 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SLC35E4Q6ICL7 350 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 LINC00596Q86U02 117 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 LY6G5BQ8NDX9 201 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 BEST4Q8NFU0 473 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR8B3Q8NGG8 313 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR13C8Q8NGS7 320 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR56B4Q8NH76 319 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 TNFRSF14Q92956 283 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 RNF183Q96D59 192 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 OR8B2Q96RD0 313 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 FXYD6Q9H0Q3 95 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SIRPDQ9H106 197 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF286AQ9HBT8 521 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HRASLSQ9HDD0 168 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 C12orf4Q9NQ89 552 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 DIABLOQ9NR28 239 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CALYQ9NYX4 217 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CLN8Q9UBY8 286 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 FLVCR2Q9UPI3 526 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV2-70DA0A0C4DH43 119 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 OR5H14A6NHG9 310 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 RNASEK-C17orf49H0YIS7 233 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 FABP7O15540 132 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 TSPAN9O75954 239 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 CD74P04233 296 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 DTYMKP23919 212 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 COX7A1P24310 79 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 ERP29P30040 261 aaKnown RBP2.86□□□□□ -1.95
SCFD1-204ENST00000463622 TALDO1P37837 337 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 GNG10P50151 68 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 ARF6P62330 175 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 GNB2P62879 340 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 RPL31P62899 125 aaKnown RBP2.86□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF45Q02386 682 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 PAX5Q02548 391 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 LRRC10Q5BKY1 277 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 AADACL3Q5VUY0 350 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 CCBE1Q6UXH8 406 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-204ENST00000463622 GDPD3Q7L5L3 318 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 SLC36A1Q7Z2H8 476 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 ODF3L1Q8IXM7 274 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 DYNAPQ8N1N2 210 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 SPICQ8N5J4 248 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 GDPD1Q8N9F7 314 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF439Q8NDP4 499 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 C8orf46Q8TAG6 207 aa2.86□□□□□ -1.95
SCFD1-204ENST00000463622 IL1F10Q8WWZ1 152 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms