RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 OR10J1P30954 320 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 PHBP35232 272 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 SNAP25P60880 206 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 FGF12P61328 243 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 PDK2Q15119 407 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 OR8G1Q15617 311 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 MAPK14Q16539 360 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 TMEM31Q5JXX7 168 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 C1orf194Q5T5A4 169 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ALKAL1Q6UXT8 129 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 C3orf62Q6ZUJ4 267 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 TRAPPC5Q8IUR0 188 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 LRRC34Q8IZ02 419 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 SLC35F6Q8N357 371 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 CD200R1Q8TD46 325 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 DEDD2Q8WXF8 326 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ABHD14BQ96IU4 210 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 FAIMQ9NVQ4 179 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 FKBP14Q9NWM8 211 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 IL20Q9NYY1 176 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 ATPIF1Q9UII2 106 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 FAM32AQ9Y421 112 aaKnown RBP2.22□□□□□ -2.05
USH2A-203ENST00000463147 TIMM22Q9Y584 194 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 DSCAMO60469 2012 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 DISP1Q96F81 1524 aa2.22□□□□□ -2.05
USH2A-203ENST00000463147 IFT140Q96RY7 1462 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 WDR7Q9Y4E6 1490 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 TCHHQ07283 1943 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 SMIM31A0A1B0GVY4 71 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 H3BQV1 296 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 KDM6AO15550 1401 aaPredicted RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 DCTN3O75935 186 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 IFNA6P05013 189 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 MAP2K4P45985 399 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 RAP1GDS1P52306 607 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 FOXA1P55317 472 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 IFITM2Q01629 132 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 MYL5Q02045 173 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 IL15RAQ13261 267 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 EBPQ15125 230 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 ACSBG2Q5FVE4 666 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 N4BP2L1Q5TBK1 243 aaPredicted RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 ZNF550Q7Z398 422 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 IFT20Q8IY31 132 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 RPRMLQ8N4K4 120 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 MMGT1Q8N4V1 131 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 Q8NAQ8 132 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 OR2T4Q8NH00 348 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 MFSD8Q8NHS3 518 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 C16orf78Q8WTQ4 265 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 NAT14Q8WUY8 206 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 RNASE6Q93091 150 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 DGCR14Q96DF8 476 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 TMEM109Q9BVC6 243 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 EIF5A2Q9GZV4 153 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 C16orf95Q9H693 158 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 GID8Q9NWU2 228 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 TAS2R1Q9NYW7 299 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 RPL26L1Q9UNX3 145 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 CARHSP1Q9Y2V2 147 aaKnown RBP2.21□□□□□ -2.06
USH2A-203ENST00000463147 R4GN34 69 aa2.21□□□□□ -2.06
USH2A-203ENST00000463147 KDM6BO15054 1643 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 EIF2AK4Q9P2K8 1649 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 MED14O60244 1454 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 NRXN1Q9ULB1 1477 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 MYO5CQ9NQX4 1742 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 EIF4G3O43432 1585 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 IQGAP2Q13576 1575 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 TRAV8-1A0A0A6YYK1 113 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 C5orf49A4QMS7 147 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 D6RAR5 112 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 EEF1E1O43324 174 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 KRT75O95678 551 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 IGHV3-53P01767 116 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 GUSBP08236 651 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 PAEPP09466 180 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 CRABP2P29373 138 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 OPRM1P35372 400 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 PPP1R2P41236 205 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 CDK9P50750 372 aaKnown RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 RELAQ04206 551 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 EMX1Q04741 257 aaPredicted RBP2.2□□□□□ -2.06
USH2A-203ENST00000463147 PRDX4Q13162 271 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 SPCS2Q15005 226 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 LIN52Q52LA3 116 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 PPP1R2P3Q6NXS1 205 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 Q6ZQT7 251 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 CROCCP2Q86T23 111 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 LYPD6Q86Y78 171 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 UBL4BQ8N7F7 174 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 OTUB2Q96DC9 234 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 TRIB3Q96RU7 358 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 C1QTNF6Q9BXI9 259 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 COQ4Q9Y3A0 265 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 WASHC3Q9Y3C0 194 aa2.2□□□□□ -2.06
USH2A-203ENST00000463147 HEY1Q9Y5J3 304 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms