RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ZMYND19Q96E35 227 aaPredicted RBP4□□□□□ -1.77
ATPAF1-203ENST00000460928 FBXO17Q96EF6 278 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 AMELYQ99218 206 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 C20orf144Q9BQM9 153 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 CACNG6Q9BXT2 260 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 SLC5A7Q9GZV3 580 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 MAGT1Q9H0U3 335 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 RGCCQ9H4X1 137 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 WDR76Q9H967 626 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 EXOSC4Q9NPD3 245 aaKnown RBP4□□□□□ -1.77
ATPAF1-203ENST00000460928 B3GAT2Q9NPZ5 323 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 SLC17A5Q9NRA2 495 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 SPANXA1Q9NS26 97 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 TAS2R16Q9NYV7 291 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 TVP23BQ9NYZ1 205 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 DNAJC27Q9NZQ0 273 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 COMMD3Q9UBI1 195 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 VAX2Q9UIW0 290 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 B9D1Q9UPM9 204 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 PPP1R3CQ9UQK1 317 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 KLHDC2Q9Y2U9 406 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 AMDHD2Q9Y303 409 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 LSM2Q9Y333 95 aaKnown RBP4□□□□□ -1.77
ATPAF1-203ENST00000460928 ARFGEF3Q5TH69 2177 aa4□□□□□ -1.77
ATPAF1-203ENST00000460928 MXRA5Q9NR99 2828 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TGP01266 2768 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 IGLV5-52A0A0A0MRZ9 124 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 IGHV1-18A0A0C4DH31 117 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 IGHV2-70DA0A0C4DH43 119 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TRDV1A0A1B0GX56 115 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 PRR32B1ATL7 298 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 F5H5P2 479 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TRAPPC2LH3BP13 241 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 XKRYO14609 159 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ARPC3O15145 178 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ST8SIA3O43173 380 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ADAP1O75689 374 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MMP23AO75900 390 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CDRT1O95170 752 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TXNDC12O95881 172 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CD5P06127 495 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CSN3P07498 182 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MRPL3P09001 348 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MMP7P09237 267 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR10J4P0C629 311 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CECR9P0C854 216 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR5H8P0DN80 308 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CALCBP10092 127 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 GZMBP10144 247 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MYOD1P15172 320 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF32P17041 273 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 AKR1C3P42330 323 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 RAB7AP51149 207 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MMP15P51511 669 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 DVL1P1P54792 670 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 SNU13P55769 128 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CDK5Q00535 292 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ST3GAL4Q11206 333 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR5I1Q13606 314 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 P2RY6Q15077 328 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 SPHARQ15513 63 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 UBE2V2Q15819 145 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OCIAD2Q56VL3 154 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 BEX5Q5H9J7 111 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 LINC01590Q5TEZ4 76 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CD200R1LQ6Q8B3 271 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 MRPL21Q7Z2W9 205 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TMED4Q7Z7H5 227 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF584Q8IVC4 421 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TMEM183AQ8IXX5 376 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 SLC22A24Q8N4F4 322 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TOMM5Q8N4H5 51 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 C11orf42Q8N5U0 333 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TCEANCQ8N8B7 351 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF738Q8NE65 137 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR2T33Q8NG76 320 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR4S1Q8NGB4 309 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR5AP2Q8NGF4 316 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR10W1Q8NGF6 305 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR52L1Q8NGH7 329 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 OR1S2Q8NGQ3 325 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 C15orf40Q8WUR7 153 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 NUDCD2Q8WVJ2 157 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 SSMEM1Q8WWF3 244 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF75AQ96N20 296 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CLCC1Q96S66 551 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 GPX7Q96SL4 187 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 LINC00470Q9BZP3 86 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 NMNAT2Q9BZQ4 307 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 RNF167Q9H6Y7 350 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 PLEKHA1Q9HB21 404 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 CDH20Q9HBT6 801 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 Q9N2K0 584 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 AMBNQ9NP70 447 aa3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 TXNL4BQ9NX01 149 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF226Q9NYT6 803 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 416.1 ms