RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 RNASEK-C17orf49H0YIS7 233 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 BUB1B-PAK6H3BSN5 160 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 FOXH1O75593 365 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 MBPP02686 304 aaPredicted RBP13.66□□□□□ -0.22
NELFCD-201ENST00000460601 ARG1P05089 322 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 MMP9P14780 707 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 PRTN3P24158 256 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 PSMB6P28072 239 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 Q5PR19 223 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 C11orf87Q6NUJ2 197 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 LHFPL4Q7Z7J7 247 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 C9orf62Q8N4C0 152 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 CITED4Q96RK1 184 aa13.66□□□□□ -0.22
NELFCD-201ENST00000460601 A0A096LNT2 108 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 MARCH11A6NNE9 402 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
NELFCD-201ENST00000460601 CXorf66Q5JRM2 361 aaPredicted RBP13.65□□□□□ -0.22
NELFCD-201ENST00000460601 RNF126Q9BV68 326 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 BEX4Q9NWD9 120 aaPredicted RBP13.65□□□□□ -0.22
NELFCD-201ENST00000460601 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 PRELID3BQ9Y3B1 194 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 LSM5Q9Y4Y9 91 aaKnown RBP13.65□□□□□ -0.22
NELFCD-201ENST00000460601 HSPB11Q9Y547 144 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 CCDC168Q8NDH2 2452 aa13.65□□□□□ -0.22
NELFCD-201ENST00000460601 TOX4O94842 621 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 USF1P22415 310 aaPredicted RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 THBS3P49746 956 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 ZNF137PP52743 207 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 CYCSP99999 105 aaKnown RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 LGALSLQ3ZCW2 172 aaPredicted RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 OR13D1Q8NGV5 346 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 ASB13Q8WXK3 278 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 RRNAD1Q96FB5 475 aaKnown RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 KPTNQ9Y664 436 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 CXCL2P19875 107 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 PRRX1P54821 245 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 DSCR9P59020 149 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
NELFCD-201ENST00000460601 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 KRTAP1-3Q8IUG1 177 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 KIR3DL3Q8N743 410 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 BEND2Q8NDZ0 799 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 R3HDM4Q96D70 268 aa13.64□□□□□ -0.23
NELFCD-201ENST00000460601 DUXBA0A1W2PPF3 345 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 RNF223E7ERA6 249 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 H0YJW9 148 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 SLC35D1Q9NTN3 355 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 H7C2Y5 167 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 HPRT1P00492 218 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 FGL1Q08830 312 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 OR1S1Q8NH92 325 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 CD300LFQ8TDQ1 290 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 LHX4Q969G2 390 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 NUP50Q9UKX7 468 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 POLR3KQ9Y2Y1 108 aaPredicted RBP13.63□□□□□ -0.23
NELFCD-201ENST00000460601 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 INSIG2Q9Y5U4 225 aa13.63□□□□□ -0.23
NELFCD-201ENST00000460601 PRRC2AP48634 2157 aaKnown RBP13.63□□□□□ -0.23
NELFCD-201ENST00000460601 SRRM4A7MD48 611 aaKnown RBP13.62□□□□□ -0.23
NELFCD-201ENST00000460601 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 K7EPK0 472 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 P0C879 139 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 SLC25A16P16260 332 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 POLR2GP62487 172 aaKnown RBP eCLIP13.62□□□□□ -0.23
NELFCD-201ENST00000460601 C1orf122Q6ZSJ8 110 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 ZNF546Q86UE3 836 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 IQCF2Q8IXL9 164 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 DMBX1Q8NFW5 382 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 OR4S2Q8NH73 311 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 THAP6Q8TBB0 222 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
NELFCD-201ENST00000460601 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
NELFCD-201ENST00000460601 PRELID1Q9Y255 219 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 RCL1Q9Y2P8 373 aaKnown RBP13.62□□□□□ -0.23
NELFCD-201ENST00000460601 MMP24Q9Y5R2 645 aa13.62□□□□□ -0.23
NELFCD-201ENST00000460601 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 LEUTXA8MZ59 168 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.23
NELFCD-201ENST00000460601 OR9G9P0C7N8 305 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 TCTEX1D1Q8N7M0 179 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 OR5AN1Q8NGI8 311 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 DCUN1D4Q92564 292 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 RITA1Q96K30 269 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 Q96MF0 132 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 HEXA-AS1Q9H8Q6 139 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 IGHV3OR16-10A0A075B7F0 116 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 LY6LH3BQJ8 138 aa13.61□□□□□ -0.23
NELFCD-201ENST00000460601 PITX3O75364 302 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms