RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PLSCR3Q9NRY6 295 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 SLC25A10Q9UBX3 287 aaPredicted RBP8.53□□□□□ -1.04
USP39-210ENST00000459775 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
USP39-210ENST00000459775 ARID1AO14497 2285 aa8.52□□□□□ -1.04
USP39-210ENST00000459775 ABCA2Q9BZC7 2435 aa8.52□□□□□ -1.04
USP39-210ENST00000459775 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 M0QXV9 152 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 TGOLN2O43493 480 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 OMGP23515 440 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 S100A7P31151 101 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 MDH2P40926 338 aaKnown RBP8.52□□□□□ -1.05
USP39-210ENST00000459775 IL13RA1P78552 427 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 NRARPQ7Z6K4 114 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 OR4C16Q8NGL9 310 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 MARCH1Q8TCQ1 289 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 PLEKHA2Q9HB19 425 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 TRAPPC2LQ9UL33 140 aa8.52□□□□□ -1.05
USP39-210ENST00000459775 IGHV4-30-2A0A087WSY4 118 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 IGHV3-7P01780 117 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 IL2RGP31785 369 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 BTCP35070 178 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 SSTR5P35346 364 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 GPR6P46095 362 aaPredicted RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 DLX1P56177 255 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TIRAPP58753 221 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 MRPS10P82664 201 aaKnown RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 RBM39Q14498 530 aaKnown RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 HERPUD1Q15011 391 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 LTC4SQ16873 150 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 HOGA1Q86XE5 327 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 H1FXQ92522 213 aaKnown RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 NOL4LQ96MY1 436 aaPredicted RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 SLC6A7Q99884 636 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 Q9N2K0 584 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TANC2Q9HCD6 1990 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 IGKV1-6A0A0C4DH72 117 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 ZNF736B4DX44 427 aaPredicted RBP8.51□□□□□ -1.05
USP39-210ENST00000459775 LYRM1O43325 122 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 SEC61GP60059 68 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 STEAP1BQ6NZ63 245 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 ZNF841Q6ZN19 808 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TCF24Q7RTU0 167 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TCF23Q7RTU1 214 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 ERASQ7Z444 233 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 OR4C5Q8NGB2 326 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 OR5D13Q8NGL4 314 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 OR1L1Q8NH94 360 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 C15orf40Q8WUR7 153 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 IL1F10Q8WWZ1 152 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 RAX2Q96IS3 184 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 MMP28Q9H239 520 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
USP39-210ENST00000459775 TRAV26-1A0A087WT03 109 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 MGST3O14880 152 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 IFNA17P01571 189 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 RPLP1P05386 114 aaKnown RBP8.5□□□□□ -1.05
USP39-210ENST00000459775 GLP1RP43220 463 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 MAPK1IP1LQ8NDC0 245 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR51S1Q8NGJ8 323 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 KIRREL1Q96J84 757 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 PARP12Q9H0J9 701 aaKnown RBP8.5□□□□□ -1.05
USP39-210ENST00000459775 ANXA10Q9UJ72 324 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 ANAPC10Q9UM13 185 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 FBXO7Q9Y3I1 522 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 KIAA2026Q5HYC2 2103 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 ODAMA1E959 279 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 C12orf77C9JDV5 145 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 NDUFB3O43676 98 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 MMP23AO75900 390 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 AMY2AP04746 511 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 CRYGBP07316 175 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 WNT2P09544 360 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 CCL3L1P16619 93 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 NFYAP23511 347 aaPredicted RBP8.5□□□□□ -1.05
USP39-210ENST00000459775 RAB25P57735 213 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 SELENOTP62341 195 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 PAX5Q02548 391 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 SCGB2B2Q4G0G5 96 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 SLC36A1Q7Z2H8 476 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 TIMD4Q96H15 378 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 RSG1Q9BU20 258 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 TAF9BQ9HBM6 251 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR6C3Q9NZP0 311 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
USP39-210ENST00000459775 IGHV4-61A0A0C4DH41 118 aa8.49□□□□□ -1.05
USP39-210ENST00000459775 CYB5BO43169 146 aa8.49□□□□□ -1.05
USP39-210ENST00000459775 CA11O75493 328 aa8.49□□□□□ -1.05
USP39-210ENST00000459775 RLN1P04808 185 aa8.49□□□□□ -1.05
USP39-210ENST00000459775 FOLR2P14207 255 aa8.49□□□□□ -1.05
USP39-210ENST00000459775 GNMTQ14749 295 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms