RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 RBMX2Q9Y388 322 aaKnown RBP16.25■□□□□ 0.19
VARS-218ENST00000459667 MEGF8Q7Z7M0 2845 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 SHOXO15266 292 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 CA2P00918 260 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 IGLV2-23P01705 113 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 AADACP22760 399 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 PPIFP30405 207 aaKnown RBP16.24■□□□□ 0.19
VARS-218ENST00000459667 DEFA6Q01524 100 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 C8orf86Q6ZUL3 223 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 KCTD9Q7L273 389 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 C6orf62Q9GZU0 229 aaPredicted RBP16.24■□□□□ 0.19
VARS-218ENST00000459667 TPSG1Q9NRR2 321 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 EHFQ9NZC4 300 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
VARS-218ENST00000459667 FBXO7Q9Y3I1 522 aa16.24■□□□□ 0.19
VARS-218ENST00000459667 G3V4G9 280 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 CTDSP2O14595 271 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 CRYZL1O95825 349 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 IGLV2-14P01704 120 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 NAT1P18440 290 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 CD33P20138 364 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 PSMB8P28062 276 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 SLC6A1P30531 599 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 RCVRNP35243 200 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 ZNF695Q8IW36 515 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 LAX1Q8IWV1 398 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 SECTM1Q8WVN6 248 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 RABL2AQ9UBK7 228 aaPredicted RBP16.23■□□□□ 0.19
VARS-218ENST00000459667 RABL2BQ9UNT1 228 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 A3GALT2U3KPV4 340 aa16.23■□□□□ 0.19
VARS-218ENST00000459667 ZNF701M0R085 212 aaPredicted RBP16.22■□□□□ 0.19
VARS-218ENST00000459667 PPYP01298 95 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 CRIP2P52943 208 aaPredicted RBP16.22■□□□□ 0.19
VARS-218ENST00000459667 HERV-K104P61576 105 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 SAMD5Q5TGI4 173 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 ZNF562Q6V9R5 426 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 ETV3LQ6ZN32 361 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 PPP1R27Q86WC6 154 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 GIMAP1Q8WWP7 306 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 SLIRPQ9GZT3 109 aaKnown RBP16.22■□□□□ 0.19
VARS-218ENST00000459667 MIXL1Q9H2W2 232 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 PRELID3BQ9Y3B1 194 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 NOTCH1P46531 2555 aa16.22■□□□□ 0.19
VARS-218ENST00000459667 PMP2P02689 132 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 CDX1P47902 265 aaPredicted RBP16.21■□□□□ 0.19
VARS-218ENST00000459667 DYRK1AQ13627 763 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 C19orf54Q5BKX5 351 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 TMEM65Q6PI78 240 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 OVCH2Q7RTZ1 564 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 TCTEX1D1Q8N7M0 179 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 MINDY2Q8NBR6 621 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 MCFD2Q8NI22 146 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 ARPC1AQ92747 370 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 BORCS5Q969J3 196 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 DIRAS2Q96HU8 199 aa16.21■□□□□ 0.19
VARS-218ENST00000459667 HSD17B10Q99714 261 aaKnown RBP16.21■□□□□ 0.19
VARS-218ENST00000459667 FAM103A1Q9BTL3 118 aaKnown RBP16.21■□□□□ 0.19
VARS-218ENST00000459667 A0A1W2PN81 502 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 SRRM4A7MD48 611 aaKnown RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 FCGR3BO75015 233 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 IGLV1-40P01703 118 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 CRYGBP07316 175 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 EGR2P11161 476 aaPredicted RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 HLA-DMAP28067 261 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 CHRNA7P36544 502 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 RFX2P48378 723 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 FXYD4P59646 89 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 RPL30P62888 115 aaKnown RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 MRPS10P82664 201 aaKnown RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 TMEM267Q0VDI3 215 aaPredicted RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 FXYD3Q14802 87 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 MSMO1Q15800 293 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 VMA21Q3ZAQ7 101 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 ACTBL2Q562R1 376 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 OR2B11Q5JQS5 317 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 WFDC9Q8NEX5 89 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 OSR1Q8TAX0 266 aaPredicted RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 TCTEX1D2Q8WW35 142 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 FCAMRQ8WWV6 532 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 SLC5A7Q9GZV3 580 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
VARS-218ENST00000459667 CCL28Q9NRJ3 127 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 NUBP2Q9Y5Y2 271 aa16.2■□□□□ 0.18
VARS-218ENST00000459667 HRH1P35367 487 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 MYCNOSP40205 109 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 TSPAN5P62079 268 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 GNB1P62873 340 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 PJVKQ0ZLH3 352 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 EIF4EBP1Q13541 118 aaPredicted RBP16.19■□□□□ 0.18
VARS-218ENST00000459667 OXLD1Q5BKU9 147 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 UNQ5815/PRO19632Q6UWF5 114 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 ZNF66Q6ZN08 573 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 LINC00482Q8N8I6 264 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 ZBTB34Q8NCN2 500 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 GRPEL2Q8TAA5 225 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 MYOZ3Q8TDC0 251 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 DCUN1D5Q9BTE7 237 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 KLK15Q9H2R5 256 aa16.19■□□□□ 0.18
VARS-218ENST00000459667 TAS2R8Q9NYW2 309 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms