RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LMO4P61968 165 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 RAB11AP62491 216 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 SUPT4H1P63272 117 aaKnown RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 HBG1P69891 147 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 HBG2P69892 147 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 LOXL1Q08397 574 aaPredicted RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MIDNQ504T8 468 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 RPL39P5Q59GN2 51 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM71E2Q8N5Q1 922 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR11H6Q8NGC7 330 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR2T10Q8NGZ9 312 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR4A5Q8NH83 315 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 NANPQ8TBE9 248 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MRGPRFQ96AM1 343 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 ST6GAL2Q96JF0 529 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 C18orf12Q96KH6 178 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 RHOVQ96L33 236 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 HARBI1Q96MB7 349 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 Q96MF0 132 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 REG4Q9BYZ8 158 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MS4A7Q9GZW8 240 aaPredicted RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 LIME1Q9H400 295 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 COA4Q9NYJ1 87 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 PRNDQ9UKY0 176 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 POLR3KQ9Y2Y1 108 aaPredicted RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 HILPDAQ9Y5L2 63 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 LOC400499M0QZD8 3231 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 FRYQ5TBA9 3013 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MALRD1Q5VYJ5 2156 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 WNK2Q9Y3S1 2297 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 USP24Q9UPU5 2620 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGHV4-30-2A0A087WSY4 118 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 DBX1A6NMT0 343 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 NCBP2LA6PVI3 153 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HMSDA8MTL9 139 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 VWC2LB2RUY7 222 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 SYNGR2O43760 224 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR2F2O95006 317 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 CNIH1O95406 144 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 MPC2O95563 127 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 IFNA7P01567 189 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 REG1BP48304 166 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HOXA1P49639 335 aaPredicted RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 CAV2P51636 162 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF134P52741 427 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ERHP84090 104 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR2F1Q13607 317 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 SSX2Q16385 188 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ARSJQ5FYB0 599 aaPredicted RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 PRSS54Q6PEW0 395 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 RBMS3Q6XE24 437 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 Q6ZPA2 131 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF833PQ6ZTB9 187 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ACOT7LQ6ZUV0 252 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 SSX9Q7RTT3 188 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 NRGNQ92686 78 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZDHHC16Q969W1 377 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 FYTTD1Q96QD9 318 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HINT2Q9BX68 163 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 ARL6Q9H0F7 186 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 UNKLQ9H9P5 680 aaKnown RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HEYLQ9NQ87 328 aaPredicted RBP4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HIF1ANQ9NWT6 349 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 CACNG5Q9UF02 275 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 PITPNC1Q9UKF7 332 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 HSPB11Q9Y547 144 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 POMT1Q9Y6A1 747 aa4.77□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGHV1-3A0A0C4DH29 117 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGHV4-61A0A0C4DH41 118 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 A0A1W2PN81 502 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 C22orf46C9J442 243 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 RNF223E7ERA6 249 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 NPFFO15130 113 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 SLC31A2O15432 143 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 MMP23AO75900 390 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 DFFBO76075 338 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 S1PR2O95136 353 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 MOSP00540 346 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 IFNA10P01566 189 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 IFNA5P01569 189 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 FBP1P09467 338 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 SLC25A4P12235 298 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 CD1BP29016 333 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 S100A11P31949 105 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 MAS1LP35410 378 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 CHRNA7P36544 502 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 P2RY1P47900 373 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 COMPP49747 757 aaPredicted RBP4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF137PP52743 207 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 DLX6P56179 175 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 ATP5IP56385 69 aaPredicted RBP4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 H2BFSP57053 126 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 SPCS3P61009 180 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 UBE2KP61086 200 aa4.76□□□□□ -1.65
RNU1-88P-201ENST00000459274 SRSF4Q08170 494 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms