RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 IL1F10Q8WWZ1 152 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 BTF3L4Q96K17 158 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 POM121L2Q96KW2 1035 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 ZNF488Q96MN9 340 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 DIRC2Q96SL1 478 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 IMMP2LQ96T52 175 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 MBNL3Q9NUK0 354 aaKnown RBP7.15□□□□□ -1.26
VPS50-208ENST00000458707 PPP1R3CQ9UQK1 317 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 UNC79Q9P2D8 2635 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 TET2Q6N021 2002 aaPredicted RBP7.15□□□□□ -1.26
VPS50-208ENST00000458707 ZNF705GA8MUZ8 300 aaPredicted RBP7.15□□□□□ -1.27
VPS50-208ENST00000458707 C9orf172C9J069 976 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 NGFP01138 241 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 IGHV3-9P01782 118 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 IGHEP01854 428 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 CRYGCP07315 174 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 CCL2P13500 99 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 IRF2P14316 349 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 CCNOP22674 350 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 IGFBP4P22692 258 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 TUBG1P23258 451 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 BRS3P32247 399 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.27
VPS50-208ENST00000458707 RTP5Q14D33 572 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 TMEM144Q7Z5S9 345 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 FGFRL1Q8N441 504 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 GBGT1Q8N5D6 347 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 DRAM1Q8N682 238 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 ZBTB34Q8NCN2 500 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 OR10G9Q8NGN4 311 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 OR10G7Q8NGN6 311 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 OR4F5Q8NH21 305 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.27
VPS50-208ENST00000458707 OR4F4Q96R69 305 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 SLC25A22Q9H936 323 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 DEPPQ9NTK1 212 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 CLEC5AQ9NY25 188 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 FUT9Q9Y231 359 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 WIPI2Q9Y4P8 454 aa7.15□□□□□ -1.27
VPS50-208ENST00000458707 EPG5Q9HCE0 2579 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 A0A096LPE4 126 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 A0A1W2PPZ6 126 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 C20orf202A1L168 122 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 ANKRD30BLA7E2S9 258 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 J3QT63 122 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 K7ESF4 209 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 TMPRSS2O15393 492 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 TRAPPC6AO75865 159 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 CLDN1O95832 211 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 COX5AP20674 150 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 FOLR3P41439 243 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 RPL15P61313 204 aaKnown RBP7.14□□□□□ -1.27
VPS50-208ENST00000458707 GNB2P62879 340 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 PAX5Q02548 391 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 Q0VFX4 171 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
VPS50-208ENST00000458707 PSG3Q16557 428 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 KCNIP4Q6PIL6 250 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 GATAD1Q8WUU5 269 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 TMEM37Q8WXS4 190 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 NAGKQ9UJ70 344 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 DNAJC13O75165 2243 aa7.14□□□□□ -1.27
VPS50-208ENST00000458707 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 A0A1W2PR80 420 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 CBY3A6NI87 242 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 LRRC30A6NM36 301 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 LILRA1O75019 489 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 WDR1O75083 606 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 RHBDL1O75783 438 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 WISP2O76076 250 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 SYNGR4O95473 234 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 TOMM40O96008 361 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 SERPINA7P05543 415 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 OR4A8P0C604 315 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 IL3RAP26951 378 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 GDF1P27539 372 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 ERVK11-1P61568 191 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 FOXL1Q12952 345 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 MSMO1Q15800 293 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 FFAR4Q5NUL3 377 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 C1orf194Q5T5A4 169 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 FAM180AQ6UWF9 173 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 Q8IYB0 196 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 NPCDR1Q9BY65 106 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 FOXJ2Q9P0K8 574 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 KCNS2Q9ULS6 477 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 PINLYPA6NC86 204 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 NTN3O00634 580 aaPredicted RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 HMGB3O15347 200 aaKnown RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 PDE6DO43924 150 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 PAGE4O60829 102 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 OR2H2O95918 312 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 NPPCP23582 126 aa7.13□□□□□ -1.27
VPS50-208ENST00000458707 FOXG1P55316 489 aaPredicted RBP7.13□□□□□ -1.27
VPS50-208ENST00000458707 SCGB2A2Q13296 93 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms