RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PRTN3P24158 256 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 ZNF137PP52743 207 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 DVL1P1P54792 670 aaPredicted RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 CLEC9AQ6UXN8 241 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 GSG1LQ6UXU4 331 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 ZNF66Q6ZN08 573 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 CMTM1Q8IZ96 169 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 C8orf31Q8N9H6 132 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 ZBTB34Q8NCN2 500 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 OR1S1Q8NH92 325 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 RBPMSQ93062 196 aaKnown RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 PCGF1Q9BSM1 259 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 CLEC7AQ9BXN2 247 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 MAGT1Q9H0U3 335 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 METTL8Q9H825 291 aaKnown RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 BEX4Q9NWD9 120 aaPredicted RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 GSKIPQ9P0R6 139 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 POLR3KQ9Y2Y1 108 aaPredicted RBP7.05□□□□□ -1.28
RIF1-208ENST00000457745 INSIG2Q9Y5U4 225 aa7.05□□□□□ -1.28
RIF1-208ENST00000457745 PLXNB1O43157 2135 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 TNCP24821 2201 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.04□□□□□ -1.28
RIF1-208ENST00000457745 FXYD6-FXYD2A0A087WZ82 144 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 BUB1B-PAK6H3BSN5 160 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 K7EPK0 472 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 M0R1W7 72 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 NDUFS8O00217 210 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 RAB29O14966 203 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 ENSAO43768 121 aaKnown RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 MPC2O95563 127 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 CRYZL1O95825 349 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 KRASP01116 189 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 RBP4P02753 201 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 CD24P25063 80 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 RAB7AP51149 207 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 PAX9P55771 341 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 OR2B8PP59922 312 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 POLR2GP62487 172 aaKnown RBP eCLIP7.04□□□□□ -1.28
RIF1-208ENST00000457745 PAX8Q06710 450 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 KLF17Q5JT82 389 aaPredicted RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 SSX9Q7RTT3 188 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 ZNF695Q8IW36 515 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 FOXRED2Q8IWF2 684 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 FAM71E2Q8N5Q1 922 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 KIR3DL3Q8N743 410 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 OR11H6Q8NGC7 330 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 CFHR4Q92496 578 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 LHX4Q969G2 390 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 C1orf159Q96HA4 380 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 Q96MF0 132 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 PDCD10Q9BUL8 212 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 RANBP3Q9H6Z4 567 aaPredicted RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 HEXA-AS1Q9H8Q6 139 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 LIN7CQ9NUP9 197 aaKnown RBP7.04□□□□□ -1.28
RIF1-208ENST00000457745 CACNG5Q9UF02 275 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 KCNIP3Q9Y2W7 256 aa7.04□□□□□ -1.28
RIF1-208ENST00000457745 A0A1B0GW64 132 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 ARPC5O15511 151 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 SCGB1D2O95969 90 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 ARG1P05089 322 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 SERPINE2P07093 398 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 IL6RP08887 468 aaPredicted RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 IGHV4-31P0DP07 118 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 IGHV4-38-2P0DP08 117 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 LYL1P12980 280 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 USF1P22415 310 aaPredicted RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 THBS3P49746 956 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 S100A10P60903 97 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 KRTAP1-1Q07627 177 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 FAM120AOSQ5T036 256 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 BEND2Q8NDZ0 799 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 OR5AN1Q8NGI8 311 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 OR10X1Q8NGY0 326 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 IL22RA2Q969J5 263 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 R3HDM4Q96D70 268 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 RAB39BQ96DA2 213 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 MBD6Q96DN6 1003 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 QTRT1Q9BXR0 403 aaKnown RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 NMES1Q9C002 83 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 UNKLQ9H9P5 680 aaKnown RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 SLC35D1Q9NTN3 355 aa7.03□□□□□ -1.28
RIF1-208ENST00000457745 LSM5Q9Y4Y9 91 aaKnown RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 ASH1LQ9NR48 2969 aaKnown RBP7.03□□□□□ -1.28
RIF1-208ENST00000457745 IGHV1-3A0A0C4DH29 117 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 CENPVL3A0A0U1RRI6 287 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 CGB1A6NKQ9 187 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 ADARB2-AS1A8MUL3 147 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 FOXH1O75593 365 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 TOX4O94842 621 aa7.02□□□□□ -1.29
RIF1-208ENST00000457745 SLC25A4P12235 298 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms