RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 DLK1P80370 383 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 HMGN3Q15651 99 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 OR2T5Q6IEZ7 315 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 FAM220AQ7Z4H9 259 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 OR5D14Q8NGL3 314 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 OR2T29Q8NH02 315 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 DYDC1Q8WWB3 177 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 ACOT12Q8WYK0 555 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
SF3B4-202ENST00000457312 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 M0R129 80 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 GPX5O75715 221 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 CLEC3BP05452 202 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 GSTT2P0CG29 244 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 GSTT2BP0CG30 244 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 RPA2P15927 270 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 GPR183P32249 361 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 CAPGP40121 348 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 SLC22A6Q4U2R8 563 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 CEACAM19Q7Z692 300 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 PARP16Q8N5Y8 322 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 CSNK1G2-AS1Q8NCQ2 148 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 DEFB104AQ8WTQ1 72 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 IL1F10Q8WWZ1 152 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 SPIN2AQ99865 258 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 SPIN2BQ9BPZ2 258 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 TMEM14BQ9NUH8 114 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
SF3B4-202ENST00000457312 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
SF3B4-202ENST00000457312 SOX2P48431 317 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 AADACL4Q5VUY2 407 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 IDO2Q6ZQW0 420 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 SLC25A42Q86VD7 318 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
SF3B4-202ENST00000457312 NSL1Q96IY1 281 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 RNF2Q99496 336 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 TEX12Q9BXU0 123 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 ZNF221Q9UK13 617 aa11.32□□□□□ -0.6
SF3B4-202ENST00000457312 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 OR2T7P0C7T2 308 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 HTN3P15516 51 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
SF3B4-202ENST00000457312 OR10H4Q8NGA5 316 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
SF3B4-202ENST00000457312 EFCAB1Q9HAE3 211 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 PEX16Q9Y5Y5 336 aa11.31□□□□□ -0.6
SF3B4-202ENST00000457312 TRBV7-1A0A0A6YYK4 115 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 HMX3A6NHT5 357 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 SPP1P10451 314 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 RAB3AP20336 220 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 SSX9Q7RTT3 188 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 STHQ8IWL8 128 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
SF3B4-202ENST00000457312 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
SF3B4-202ENST00000457312 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 TRBV5-7A0A0A0MS05 114 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 OR4C45A6NMZ5 311 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 GTF2F2P13984 249 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 DEFB131AP59861 70 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 ZNF85Q03923 595 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 PLET1Q6UQ28 207 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 JAM3Q9BX67 310 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 C11orf54Q9H0W9 315 aaPredicted RBP11.29□□□□□ -0.6
SF3B4-202ENST00000457312 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
SF3B4-202ENST00000457312 KLK9Q9UKQ9 250 aa11.29□□□□□ -0.6
SF3B4-202ENST00000457312 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 M0R1X1 148 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 ZNF207O43670 478 aaKnown RBP11.28□□□□□ -0.6
SF3B4-202ENST00000457312 OXTP01178 125 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 HSD17B1P14061 328 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 CCR9P51686 369 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 UBE2KP61086 200 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
SF3B4-202ENST00000457312 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 AASSQ9UDR5 926 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
SF3B4-202ENST00000457312 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 CCDC22O60826 627 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 IRF3Q14653 427 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.61
SF3B4-202ENST00000457312 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 GIMAP1Q8WWP7 306 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 FYTTD1Q96QD9 318 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms