RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 A0A1W2PPQ1 181 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 C1QTNF9BB2RNN3 333 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 MLNRO43193 412 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 NUPR1O60356 82 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 IGHV3-13P01766 116 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 IGHV3-7P01780 117 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 CRYAAP02489 173 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 HOXC12P31275 282 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 FAM3BP58499 235 aaPredicted RBP10.38□□□□□ -0.75
LINC00959-201ENST00000456581 FOXC1Q12948 553 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 OR52L2PQ8NGH6 319 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 OR51G1Q8NGK1 321 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 TAF15Q92804 592 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00959-201ENST00000456581 RTL8AQ9BWD3 113 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 DEFB108AA8MXU0 73 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 EREGO14944 169 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 PSPNO60542 156 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 IGKV3-15P01624 115 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 OR4A8P0C604 315 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 OR8G1Q15617 311 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 LTC4SQ16873 150 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 Q3ZCU0 254 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
LINC00959-201ENST00000456581 SNIP1Q8TAD8 396 aaKnown RBP10.38□□□□□ -0.75
LINC00959-201ENST00000456581 ABHD14BQ96IU4 210 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
LINC00959-201ENST00000456581 PLSCR4Q9NRQ2 329 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
LINC00959-201ENST00000456581 ABCA4P78363 2273 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 J3QT63 122 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 CGAP01215 116 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 CTXN2P0C2S0 81 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 NPPCP23582 126 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 SSX2Q16385 188 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 MSMPQ1L6U9 139 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 TMEM41BQ5BJD5 291 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 NCR3LG1Q68D85 454 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 Q6ZS92 163 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 C22orf34Q6ZV56 151 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 OR4F4Q96R69 305 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 OR2D2Q9H210 308 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 VAX2Q9UIW0 290 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 AHRRA9YTQ3 701 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 ZG16O60844 167 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 S1PR2O95136 353 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF474Q6S9Z5 364 aaPredicted RBP10.37□□□□□ -0.75
LINC00959-201ENST00000456581 Q6ZR03 302 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 TGIF2LXQ8IUE1 241 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 DERL1Q9BUN8 251 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 PROCRQ9UNN8 238 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 HCFC1P51610 2035 aa10.37□□□□□ -0.75
LINC00959-201ENST00000456581 LRBAP50851 2863 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 NXPH2O95156 264 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
LINC00959-201ENST00000456581 S100GP29377 79 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 CHRNA7P36544 502 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 RND2P52198 227 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 UBE2G2P60604 165 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
LINC00959-201ENST00000456581 MEF2BQ02080 365 aaPredicted RBP10.36□□□□□ -0.75
LINC00959-201ENST00000456581 REC114Q7Z4M0 266 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 RFESDQ8TAC1 157 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 PKIBQ9C010 78 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 PARLQ9H300 379 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 IGHV1-18A0A0C4DH31 117 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 HNF1AP20823 631 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 OR3A1P47881 315 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF83P51522 516 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 AESQ08117 197 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 IGFL3Q6UXB1 125 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF66Q6ZN08 573 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 SH3BGRL2Q9UJC5 107 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 FUT9Q9Y231 359 aa10.36□□□□□ -0.75
LINC00959-201ENST00000456581 XKRY2A2RUG3 117 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.35□□□□□ -0.75
LINC00959-201ENST00000456581 PAGE4O60829 102 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 RBMXL2O75526 392 aaKnown RBP10.35□□□□□ -0.75
LINC00959-201ENST00000456581 RAC2P15153 192 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 CASP6P55212 293 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 HBG1P69891 147 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 HBG2P69892 147 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 MRGPRGQ86SM5 289 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 DCTN5Q9BTE1 182 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 TACC2O95359 2948 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms