RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GALR1P47211 349 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 PSMB3P49720 205 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 LHX2P50458 406 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 RNPS1Q15287 305 aaKnown RBP9.48□□□□□ -0.89
DDR1-240ENST00000454612 ABHD5Q8WTS1 349 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 MSI2Q96DH6 328 aaKnown RBP9.48□□□□□ -0.89
DDR1-240ENST00000454612 BOD1Q96IK1 185 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
DDR1-240ENST00000454612 PROCRQ9UNN8 238 aa9.48□□□□□ -0.89
DDR1-240ENST00000454612 PTPRQQ9UMZ3 2332 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 HSBP1L1C9JCN9 74 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 ZG16O60844 167 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 UCP2P55851 309 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 CLDN18P56856 261 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 RANP62826 216 aaKnown RBP9.47□□□□□ -0.89
DDR1-240ENST00000454612 KCNMB1Q16558 191 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 OR1P1Q8NH06 330 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
DDR1-240ENST00000454612 MYOZ1Q9NP98 299 aaPredicted RBP9.47□□□□□ -0.89
DDR1-240ENST00000454612 NUP210LQ5VU65 1888 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 PAGE4O60829 102 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 RAMP3O60896 148 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 HBZP02008 142 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 OR10J1P30954 320 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 WNT5AP41221 380 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 TNFSF10P50591 281 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 B3GALT5-AS1P59052 145 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 SLC35B1P78383 322 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 TMEM171Q8WVE6 324 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 CCL17Q92583 94 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 BET1LQ9NYM9 111 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 TRAV38-1A0A0B4J264 116 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 TMEM30CPA0ZSE6 113 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 J3QT63 122 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 CCL1P22362 96 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 COL10A1Q03692 680 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 RTP5Q14D33 572 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 HIST3H3Q16695 136 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 KLF14Q8TD94 323 aaPredicted RBP9.47□□□□□ -0.89
DDR1-240ENST00000454612 Q8WTZ3 238 aa9.47□□□□□ -0.89
DDR1-240ENST00000454612 PTPN13Q12923 2485 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 RNF212BA8MTL3 300 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 S1PR2O95136 353 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 DANCRP0C864 163 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 PSG7Q13046 419 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.89
DDR1-240ENST00000454612 OR10G4Q8NGN3 311 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 OR10G9Q8NGN4 311 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 OR10G7Q8NGN6 311 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 NAGKQ9UJ70 344 aa9.46□□□□□ -0.89
DDR1-240ENST00000454612 SETD2Q9BYW2 2564 aaPredicted RBP9.46□□□□□ -0.89
DDR1-240ENST00000454612 TRAV24A0A0B4J272 114 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
DDR1-240ENST00000454612 FAM3BP58499 235 aaPredicted RBP9.46□□□□□ -0.9
DDR1-240ENST00000454612 TPPP2P59282 170 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.9
DDR1-240ENST00000454612 IGLV3-32A0A0A0MS00 114 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 CDS2O95674 445 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 GCGP01275 180 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 TSPAN7P41732 249 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 ERVFRD-1P60508 538 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 FOXF2Q12947 444 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 RIPPLY2Q5TAB7 128 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 Q6ZRM9 215 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 DRAM1Q8N682 238 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 ACY3Q96HD9 319 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 MPC1Q9Y5U8 109 aa9.46□□□□□ -0.9
DDR1-240ENST00000454612 RRP8O43159 456 aaKnown RBP9.45□□□□□ -0.9
DDR1-240ENST00000454612 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ABHD12Q8N2K0 398 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 WDYHV1Q96HA8 205 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 MDFIC2A0A1B0GVS7 189 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 OR5B21A6NL26 309 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 OR7C2O60412 319 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ACSM6Q6P461 480 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 PPP1R35Q8TAP8 253 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 CMTM2Q8TAZ6 248 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 SARAFQ96BY9 339 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 POM121L2Q96KW2 1035 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 EGLN1Q9GZT9 426 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 TMEM50AO95807 157 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 OR5G3P0C626 314 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 HLA-GP17693 338 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 CCKARP32238 428 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 THBS3P49746 956 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
DDR1-240ENST00000454612 ACOT6Q3I5F7 207 aaPredicted RBP9.45□□□□□ -0.9
DDR1-240ENST00000454612 ZADH2Q8N4Q0 377 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms