RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 HRH1P35367 487 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
HDAC4-205ENST00000454542 FOXE3Q13461 319 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 MRGPRG-AS1Q2M3A8 158 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 VAX1Q5SQQ9 334 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 OR5H2Q8NGV7 314 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
HDAC4-205ENST00000454542 C15orf40Q8WUR7 153 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 FCN1O00602 326 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 RGS5O15539 181 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 SLC25A17O43808 307 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 CRYZL1O95825 349 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 CA2P00918 260 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 PMP2P02689 132 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 ELANEP08246 267 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-205ENST00000454542 VDAC1P21796 283 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 PSMB8P28062 276 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 RFX2P48378 723 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 UBE2KP61086 200 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 RPL23AP62750 156 aaKnown RBP11.1□□□□□ -0.63
HDAC4-205ENST00000454542 CX3CL1P78423 397 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 MRPS10P82664 201 aaKnown RBP11.1□□□□□ -0.63
HDAC4-205ENST00000454542 CBX3Q13185 183 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 NSUN5P1Q3KNT7 163 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 ACTBL2Q562R1 376 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 SECTM1Q8WVN6 248 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 PARP11Q9NR21 331 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 MTFP1Q9UDX5 166 aa11.1□□□□□ -0.63
HDAC4-205ENST00000454542 PLXNB1O43157 2135 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
HDAC4-205ENST00000454542 CTDSPLO15194 276 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 SHOXO15266 292 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 TBPP20226 339 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 HLA-DMAP28067 261 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 SLC6A1P30531 599 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 FXYD4P59646 89 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 HERV-K104P61576 105 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 PLGLAQ15195 96 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 PPP1R27Q86WC6 154 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 MFSD4AQ8N468 514 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 TCTEX1D1Q8N7M0 179 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 MINDY2Q8NBR6 621 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 OR4F17Q8NGA8 305 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 SMIM4Q8WVI0 70 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 OR4F4Q96R69 305 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF2Q9BSG1 426 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-205ENST00000454542 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 RABL2AQ9UBK7 228 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-205ENST00000454542 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
HDAC4-205ENST00000454542 RABL2BQ9UNT1 228 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 PRELID3BQ9Y3B1 194 aa11.09□□□□□ -0.63
HDAC4-205ENST00000454542 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 G3V318 75 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■□□□ 13
HDAC4-205ENST00000454542 FCGR3BO75015 233 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-205ENST00000454542 GNRHRP30968 328 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 KIR2DS2P43631 304 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 SSBP1Q04837 148 aaKnown RBP11.08□□□□□ -0.64
HDAC4-205ENST00000454542 PYHIN1Q6K0P9 492 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 ETV3LQ6ZN32 361 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 TEX45Q8NA69 505 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-205ENST00000454542 TCTEX1D2Q8WW35 142 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 KLK11Q9UBX7 282 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 NUBP2Q9Y5Y2 271 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 A3GALT2U3KPV4 340 aa11.08□□□□□ -0.64
HDAC4-205ENST00000454542 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 SOX15O60248 233 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 CD74P04233 296 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 RPLP1P05386 114 aaKnown RBP11.07□□□□□ -0.64
HDAC4-205ENST00000454542 DGCR2P98153 550 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 VMA21Q3ZAQ7 101 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 RNASE12Q5GAN4 147 aaKnown RBP11.07□□□□□ -0.64
HDAC4-205ENST00000454542 OR2B11Q5JQS5 317 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 CXorf66Q5JRM2 361 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-205ENST00000454542 AADACL3Q5VUY0 350 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
HDAC4-205ENST00000454542 OR6F1Q8NGZ6 308 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 MCFD2Q8NI22 146 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 R3HDM4Q96D70 268 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms