RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SRFP11831 508 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CBLN1P23435 193 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MFAP2P55001 183 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PRSS12P56730 875 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 AGERQ15109 404 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MLF2Q15773 248 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 CDKN3Q16667 212 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TMEM52BQ4KMG9 183 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 DMRTC1Q5HYR2 192 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 C1QL3Q5VWW1 255 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LYZL2Q7Z4W2 148 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TCEAL8Q8IYN2 117 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZDHHC23Q8IYP9 409 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZADH2Q8N4Q0 377 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 GVQW1Q8N7I0 195 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PIGTQ969N2 578 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PTH2Q96A98 100 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RAB1BQ9H0U4 201 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 AURKAIP1Q9NWT8 199 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 C5AR2Q9P296 337 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 UFC1Q9Y3C8 167 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 R4GN57 208 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 NPIPB13A6NJU9 1138 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 NPIPB4C9JG80 1138 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PPIAL4DF5H284 164 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 H3BMG7 143 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 DHHO43323 396 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 DPM2O94777 84 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 NXPH3O95157 252 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF865P0CJ78 1059 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 COX8AP10176 69 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 GABRG2P18507 467 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 EFNB2P52799 333 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RBM11P57052 281 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF121P58317 390 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 GNG3P63215 75 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CCL20P78556 96 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RELBQ01201 579 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 DPTQ07507 201 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 UTF1Q5T230 341 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 BVES-AS1Q5T3Y7 98 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LINC01545Q5VT33 79 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PTCRAQ6ISU1 281 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 ACSM6Q6P461 480 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.9□□□□□ -2.11
USP53-202ENST00000450251 Q6ZVL8 140 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LRRC75A-AS1Q8N1F1 130 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 C18orf32Q8TCD1 76 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PIGCQ92535 297 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 FGF11Q92914 225 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PYGO2Q9BRQ0 406 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 KLF16Q9BXK1 252 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 GFRA4Q9GZZ7 299 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 C1RLQ9NZP8 487 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 SS18L2Q9UHA2 77 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MOB4Q9Y3A3 225 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MYO16Q9Y6X6 1858 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 BTAF1O14981 1849 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TRAV2A0A0B4J234 112 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 A0A1B0GTL3 188 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TMEM213A2RRL7 107 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MSGN1A6NI15 193 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TMEM88BA6NKF7 163 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 C3orf79P0CE67 100 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 EDDM3BP56851 147 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 HSPE1P61604 102 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 RPL30P62888 115 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 FKBP1BP68106 108 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PSG5Q15238 335 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 NR0B2Q15466 257 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PPP1R27Q86WC6 154 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 C12orf76Q8N812 135 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 BCORP1Q8N888 145 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 OR13H1Q8NG92 308 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 OR4C3Q8NH37 302 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ABHD5Q8WTS1 349 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LIPHQ8WWY8 451 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 KISS1RQ969F8 398 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 ALKBH3Q96Q83 286 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 S1PR3Q99500 378 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 R3HDMLQ9H3Y0 253 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 WDR54Q9H977 334 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 NPVFQ9HCQ7 196 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PILRBQ9UKJ0 227 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PRNDQ9UKY0 176 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 INSL6Q9Y581 213 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MUC21A0A0G2JKD1 596 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 KIR2DS5A0A0G2JLQ3 304 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 A0A0G2JNG1 304 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MUC21A0A140T8X8 626 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 FAM231BA6NCW3 169 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF840PA6NDX5 716 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CEACAM18A8MTB9 384 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 M0R135 149 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PLPP3O14495 311 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 UPK3AO75631 287 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms