RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 PHF3Q92576 2039 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 KRASP01116 189 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 C20orf196Q8IYI0 205 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 LYZL4Q96KX0 146 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 SPRY4Q9C004 299 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR2T8A6NH00 312 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 SPRY1O43609 319 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 Q6ZS49 121 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 AAED1Q7RTV5 226 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 UHRF2Q96PU4 802 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 TRAPPC2LH3BP13 241 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 AMTP48728 403 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 RPS18P62269 152 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 TBC1D26Q86UD7 250 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 SSR4P51571 173 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZIC4Q8N9L1 334 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 H0Y980 276 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM267Q0VDI3 215 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR4S2Q8NH73 311 aa11.4□□□□□ -0.58
SYNGAP1-204ENST00000449372 NCKAP5O14513 1909 aa11.4□□□□□ -0.59
SYNGAP1-204ENST00000449372 OR7C2O60412 319 aa11.4□□□□□ -0.59
SYNGAP1-204ENST00000449372 MUC15Q8N387 334 aa11.4□□□□□ -0.59
SYNGAP1-204ENST00000449372 TAX1BP3O14907 124 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 SP9P0CG40 484 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 ID3Q02535 119 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 RBPJQ06330 500 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 PMCHP20382 165 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 UCP1P25874 307 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 NPBWR2P48146 333 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 TMEM186Q96B77 213 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 RAC3P60763 192 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 SARAFQ96BY9 339 aa11.39□□□□□ -0.59
SYNGAP1-204ENST00000449372 PAX2Q02962 417 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 Q0VFX4 171 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 MOB1BQ7L9L4 216 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 MRPL21Q7Z2W9 205 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 C1QTNF9BB2RNN3 333 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 GNG7O60262 68 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 LGALS7P47929 136 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 PAX9P55771 341 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 Q0VG73 95 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 FAM71F2Q6NXP2 309 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 P04436 131 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 CCL3P10147 92 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 PRRX1P54821 245 aa11.38□□□□□ -0.59
SYNGAP1-204ENST00000449372 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 ZIC3O60481 467 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 PPP1R32Q7Z5V6 425 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 LRFN3Q9BTN0 628 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 TMEM38BQ9NVV0 291 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 A0A1W2PNU3 283 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 FCN1O00602 326 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 MLNRO43193 412 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 RBFOX2O43251 390 aaKnown RBP eCLIP11.37□□□□□ -0.598e-7■■■■□ 24.2
SYNGAP1-204ENST00000449372 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 LPAL2Q16609 132 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 MPV17L2Q567V2 206 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 KMT2EQ8IZD2 1858 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 SHANK1Q9Y566 2161 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 ARG2P78540 354 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 PLP2Q04941 152 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 TMEM42Q69YG0 159 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 STUMQ69YW2 141 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 RPP25LQ8N5L8 163 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 FOXB1Q99853 325 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 SLC7A10Q9NS82 523 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 ARHGAP21Q5T5U3 1957 aa11.37□□□□□ -0.59
SYNGAP1-204ENST00000449372 G3V4G9 280 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 LIFP15018 202 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 KIAA1324LA8MWY0 1029 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 G3V3Y1 287 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 RAB29O14966 203 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 CRYGSP22914 178 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 MC5RP33032 325 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 GFRA1P56159 465 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 ARRDC1-AS1Q9H2J1 176 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 GNB4Q9HAV0 340 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 WASHC3Q9Y3C0 194 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 C9orf172C9J069 976 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 PAGE4O60829 102 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 ZNF32P17041 273 aa11.36□□□□□ -0.59
SYNGAP1-204ENST00000449372 KITLGP21583 273 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms