RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 WFDC8Q8IUA0 241 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 FAM216BQ8N7L0 139 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 Q8TCH9 128 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 MMP23AO75900 390 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 TAS2R30P59541 319 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
SF1-211ENST00000448404 TNFRSF9Q07011 255 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 KIAA0141Q14154 515 aaPredicted RBP12.3□□□□□ -0.44
SF1-211ENST00000448404 C1orf185Q5T7R7 199 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 MBNL2Q5VZF2 373 aaKnown RBP12.3□□□□□ -0.44
SF1-211ENST00000448404 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 MUCL1Q96DR8 90 aa12.3□□□□□ -0.44
SF1-211ENST00000448404 ABCA1O95477 2261 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
SF1-211ENST00000448404 KLF3P57682 345 aaPredicted RBP12.29□□□□□ -0.44
SF1-211ENST00000448404 PDZD11Q5EBL8 140 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 ZNF343Q6P1L6 599 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 CCL13Q99616 98 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 DUXBA0A1W2PPF3 345 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 SOX15O60248 233 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 IFNA5P01569 189 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 OR9G9P0C7N8 305 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 S100A2P29034 98 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 GNG10P50151 68 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 TFF3Q07654 80 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 GATAD1Q8WUU5 269 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 RAB40CQ96S21 281 aa12.29□□□□□ -0.44
SF1-211ENST00000448404 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
SF1-211ENST00000448404 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
SF1-211ENST00000448404 SRRM5B3KS81 715 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 M0R1X1 148 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 GYPAP02724 150 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 ICAM4Q14773 271 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 LSM10Q969L4 123 aaKnown RBP12.28□□□□□ -0.44
SF1-211ENST00000448404 MMP24Q9Y5R2 645 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 A0A0G2JNJ9 132 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 OPN1MWP04001 364 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 SLC38A11Q08AI6 406 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 EIF4EBP1Q13541 118 aaPredicted RBP12.28□□□□□ -0.44
SF1-211ENST00000448404 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 FAM90A1Q86YD7 464 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 PRO1933Q9H354 126 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 Q9UFV3 132 aa12.28□□□□□ -0.44
SF1-211ENST00000448404 CLDN14O95500 239 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 IFNA17P01571 189 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 BAXQ07812 192 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 DOLPP1Q86YN1 238 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 SCGB1C1Q8TD33 95 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 SLC25A22Q9H936 323 aa12.27□□□□□ -0.44
SF1-211ENST00000448404 MARCH11A6NNE9 402 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 HOXA5P20719 270 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 GPR12P47775 334 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
SF1-211ENST00000448404 RTP5Q14D33 572 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 TIMM23BQ5SRD1 257 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.45
SF1-211ENST00000448404 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
SF1-211ENST00000448404 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
SF1-211ENST00000448404 LRRC30A6NM36 301 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
SF1-211ENST00000448404 DLX1P56177 255 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 IGFL3Q6UXB1 125 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 H2BFWTQ7Z2G1 175 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
SF1-211ENST00000448404 TUBA4BQ9H853 241 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 GFOD1Q9NXC2 390 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 A8MXE2 369 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 SPINT2O43291 252 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 IGHV1-46P01743 117 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 MORN2Q502X0 79 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
SF1-211ENST00000448404 H3BQ15 152 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 SCAF4O95104 1147 aaKnown RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 CDX1P47902 265 aaPredicted RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 RAB11AP62491 216 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 Q8NA96 180 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 CLDND2Q8NHS1 167 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 MAP1AP78559 2803 aaPredicted RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 DYSFO75923 2080 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 CD40P25942 277 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 GAMTQ14353 236 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 GFI1BQ5VTD9 330 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 R3HDM4Q96D70 268 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 PBDC1Q9BVG4 233 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms