RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 DCUN1D5Q9BTE7 237 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 FAM103A1Q9BTL3 118 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 ST6GALNAC5Q9BVH7 336 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 TXNL4BQ9NX01 149 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 SDHAF2Q9NX18 166 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 ZNF230Q9UIE0 474 aaPredicted RBP8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 DAPK2Q9UIK4 370 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 MRPS7Q9Y2R9 242 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 KCNK7Q9Y2U2 307 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 NUBP2Q9Y5Y2 271 aa8.53□□□□□ -1.04
NPIPB3-202ENST00000448012 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 A0A0B4J203 849 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 SMIM30A4D0T7 59 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 H3BUA1 57 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 I3L521 148 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 MPPED1O15442 326 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 SAP30O75446 220 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 CD36P16671 472 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 NDPQ00604 133 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 PLA2G7Q13093 441 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 Q6ZS49 121 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 ZNF429Q86V71 674 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 BVESQ8NE79 360 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 ELOVL1Q9BW60 279 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 TOLLIPQ9H0E2 274 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 DCSTAMPQ9H295 470 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 ZNF256Q9Y2P7 627 aaPredicted RBP8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 PRELID3BQ9Y3B1 194 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 TGP01266 2768 aa8.52□□□□□ -1.05
NPIPB3-202ENST00000448012 LOC100506127A0A0U1RQW1 187 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 GABARAPO95166 117 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 NHLRC4P0CG21 123 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 ZP3P21754 424 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 ARPC4P59998 168 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 TIMM50Q3ZCQ8 353 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 HACD4Q5VWC8 232 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 SFXN4Q6P4A7 337 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 ANKRD13BQ86YJ7 626 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 POC5Q8NA72 575 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 OR6Q1Q8NGQ2 317 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 CASTOR1Q8WTX7 329 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 DCUN1D4Q92564 292 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 YIPF6Q96EC8 236 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 PRR25Q96S07 402 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 FUNDC2Q9BWH2 189 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 NAA50Q9GZZ1 169 aaKnown RBP8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 FBXO7Q9Y3I1 522 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 ETV7Q9Y603 341 aa8.51□□□□□ -1.05
NPIPB3-202ENST00000448012 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 J3QRK9 145 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 PROP1O75360 226 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 CRYZL1O95825 349 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 AADACP22760 399 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 SDC2P34741 201 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 SCAND1P57086 179 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 MXD1Q05195 221 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 KIAA0141Q14154 515 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 TATDN3Q17R31 274 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 CNIH2Q6PI25 160 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 H1FOOQ8IZA3 346 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 TEX45Q8NA69 505 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 OSR1Q8TAX0 266 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 LGALS14Q8TCE9 139 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 RANGRFQ9HD47 186 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 RHBDL2Q9NX52 303 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
NPIPB3-202ENST00000448012 IGHV4OR15-8A0A075B7B6 117 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 A0A087WW49 117 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 TMEM235A6NFC5 223 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 SOX15O60248 233 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 TUSC2O75896 110 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 EGR2P11161 476 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 SLURP1P55000 103 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 LINC00205P59089 165 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 UBE2KP61086 200 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 TNXAQ16473 311 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 IDNKQ5T6J7 187 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 KCTD9Q7L273 389 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 ZNF645Q8N7E2 425 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 VSTM2AQ8TAG5 236 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 ACOT12Q8WYK0 555 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 DLX4Q92988 240 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 RSRP1Q9BUV0 290 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 ALX4Q9H161 411 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 OR51E2Q9H255 320 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
NPIPB3-202ENST00000448012 A0A0A6YYH2 397 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 A6NJ64 397 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 FCGR3BO75015 233 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms