RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 FAM90A24PP0C7X0 464 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 ARF1P84077 181 aaKnown RBP13.49□□□□□ -0.25
CNOT3-204ENST00000447684 ST6GALNAC3Q8NDV1 305 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 LOXL4Q96JB6 756 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 STRADBQ9C0K7 418 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 A0A0J9YW62 118 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 Q0VG73 95 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
CNOT3-204ENST00000447684 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 BORCS7Q96B45 105 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 FOXB1Q99853 325 aa13.49□□□□□ -0.25
CNOT3-204ENST00000447684 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 A0A1W2PS18 150 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 A8MXE2 369 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 DEGS1O15121 323 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 OTX2P32243 289 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 GFRA1P56159 465 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 PSG7Q13046 419 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 IGFBP7Q16270 282 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 RPEL1Q2QD12 228 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 SLC23A3Q6PIS1 610 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 FADS6Q8N9I5 356 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 ZNF391Q9UJN7 358 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 ZNF83P51522 516 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 AAED1Q7RTV5 226 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 DRAM1Q8N682 238 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
CNOT3-204ENST00000447684 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 GTF3C1Q12789 2109 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 TRAV24A0A0B4J272 114 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 ODAMA1E959 279 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 K7EN84 100 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 TNFSF4P23510 183 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 SRIP30626 198 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 MRPL21Q7Z2W9 205 aaKnown RBP13.47□□□□□ -0.25
CNOT3-204ENST00000447684 KCNS1Q96KK3 526 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 PRUNE2Q8WUY3 3088 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 FAM166BA8MTA8 275 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 TOMM40O96008 361 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 CELA2AP08217 269 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 COL8A2P25067 703 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 LGALS4P56470 323 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 SMIM15Q7Z3B0 74 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 SPOCK3Q9BQ16 436 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
CNOT3-204ENST00000447684 FRYQ5TBA9 3013 aa13.46□□□□□ -0.25
CNOT3-204ENST00000447684 LRP5LA4QPB2 252 aa13.46□□□□□ -0.25
CNOT3-204ENST00000447684 DUX1O43812 170 aa13.46□□□□□ -0.25
CNOT3-204ENST00000447684 TIAF1O95411 115 aa13.46□□□□□ -0.25
CNOT3-204ENST00000447684 RPL31P62899 125 aaKnown RBP13.46□□□□□ -0.25
CNOT3-204ENST00000447684 STUMQ69YW2 141 aa13.46□□□□□ -0.25
CNOT3-204ENST00000447684 IGLV3-12A0A075B6K2 115 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 FAM90A26D6RGX4 464 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.26
CNOT3-204ENST00000447684 FXYD3Q14802 87 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.26
CNOT3-204ENST00000447684 FAM58AQ8N1B3 248 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 CD207Q9UJ71 328 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 R4GN57 208 aa13.46□□□□□ -0.26
CNOT3-204ENST00000447684 IGHV2-70DA0A0C4DH43 119 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 IGHV3-64DA0A0J9YX35 117 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 LRRC30A6NM36 301 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 Q56UQ5 140 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 Q6ZS52 159 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 ST6GALNAC6Q969X2 333 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-204ENST00000447684 DLL3Q9NYJ7 618 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 TP73-AS1Q9UF72 201 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 C19orf25Q9UFG5 118 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-204ENST00000447684 CHCHD2Q9Y6H1 151 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-204ENST00000447684 A0A096LPE4 126 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 A0A1W2PPZ6 126 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 LMO7DNF2Z398 122 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 CA6P23280 308 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 RELBQ01201 579 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
CNOT3-204ENST00000447684 S1PR2O95136 353 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 PRRX1P54821 245 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 KRTAP27-1Q3LI81 207 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 PDLIM3Q53GG5 364 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-204ENST00000447684 YTHDF2Q9Y5A9 579 aaKnown RBP13.44□□□□□ -0.26
CNOT3-204ENST00000447684 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 CA2P00918 260 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 CCL3P10147 92 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 TRIM61Q5EBN2 209 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 FAM53AQ6NSI3 398 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-204ENST00000447684 Q8NFD4 153 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 ZNF596Q8TC21 504 aa13.44□□□□□ -0.26
CNOT3-204ENST00000447684 GMPPAQ96IJ6 420 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-204ENST00000447684 GSX1Q9H4S2 264 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-204ENST00000447684 RRHO14718 337 aa13.43□□□□□ -0.26
CNOT3-204ENST00000447684 CLDN14O95500 239 aa13.43□□□□□ -0.26
CNOT3-204ENST00000447684 CD1BP29016 333 aa13.43□□□□□ -0.26
CNOT3-204ENST00000447684 PCBD1P61457 104 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms