RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TIAM2Q8IVF5 1701 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 USP34Q70CQ2 3546 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 TPRP12270 2363 aaKnown RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 TAF1LQ8IZX4 1826 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 SMIM9A6NGZ8 99 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 B4DEV8 164 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 D6RAR5 112 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR13C7P0DN81 318 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR12D1P0DN82 309 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 UCHL3P15374 230 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 PRPS1L1P21108 318 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 GABARAPL2P60520 117 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 SNAP25P60880 206 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 SPCS3P61009 180 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 RPS24P62847 133 aaKnown RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 FABP5Q01469 135 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 DR1Q01658 176 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 EMX1Q04741 257 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 TMEM267Q0VDI3 215 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 JOSD1Q15040 202 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 GUK1Q16774 197 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 HIST2H3PS2Q5TEC6 136 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 HES3Q5TGS1 186 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 EBLN2Q6P2I7 272 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 FAM131AQ6UXB0 335 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 LRRC25Q8N386 305 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 YIPF7Q8N8F6 280 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 ITLN2Q8WWU7 325 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF285Q96NJ3 590 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 PEBP4Q96S96 227 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 RNF5Q99942 180 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 SELENOSQ9BQE4 189 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 TLNRD1Q9H1K6 362 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 PRELID1Q9Y255 219 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZFHX4Q86UP3 3567 aa2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 NUP214P35658 2090 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P48-201ENST00000446155 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 DOT1LQ8TEK3 1739 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 TRAV8-1A0A0A6YYK1 113 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 IZUMO1RA6ND01 250 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 H3BSA7 217 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 K7EQS6 105 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 CDRT1O95170 752 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 LTAP01374 205 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR5AC1P0C628 307 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 LINC00869P0C866 280 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 CD36P16671 472 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 ORM2P19652 201 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 NTF3P20783 257 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 HLA-DRB3P79483 266 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 PRSS54Q6PEW0 395 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 S100A7AQ86SG5 101 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM86BQ8N661 226 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR51D1Q8NGF3 324 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR8S1Q8NH09 359 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 JOSD2Q8TAC2 188 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR51I2Q9H344 312 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 TXNIPQ9H3M7 391 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 FAM60AQ9NP50 221 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 GLTPQ9NZD2 209 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 STOML2Q9UJZ1 356 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 FBXO5Q9UKT4 447 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 MMACHCQ9Y4U1 282 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 PTPRZ1P23471 2315 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 BAZ2AQ9UIF9 1905 aaKnown RBP2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 RGPD5Q99666 1765 aa2.77□□□□□ -1.97
HMGB1P48-201ENST00000446155 KTN1Q86UP2 1357 aaKnown RBP2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 BPTFQ12830 3046 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGHV3-43A0A0B4J1X8 118 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 E5RI56 91 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 CHP2O43745 196 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 FBP1P09467 338 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 CISD3P0C7P0 127 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 HSPA9P38646 679 aaKnown RBP2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 GNG10P50151 68 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 CDK9P50750 372 aaKnown RBP2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MMDQ15546 238 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 BATFQ16520 125 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MAPK14Q16539 360 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF567Q8N184 647 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MIR7-3HGQ8N6C7 128 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 UBALD1Q8TB05 177 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 Q8WTZ3 238 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 AP3S1Q92572 193 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MAL2Q969L2 176 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 SLC35B4Q969S0 331 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 DIRAS2Q96HU8 199 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 SLC35G5Q96KT7 338 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR2V2Q96R30 315 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 IL37Q9NZH6 218 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF492Q9P255 531 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MAP2P11137 1827 aaKnown RBP2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 MYO10Q9HD67 2058 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 XIRP2A4UGR9 3374 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms