RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SNHG12Q9BXW3 62 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 HSPB7Q9UBY9 170 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.5
ERCC3-203ENST00000445889 WISP2O76076 250 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 HAND1O96004 215 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 GNB1P62873 340 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
ERCC3-203ENST00000445889 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 H2BFWTQ7Z2G1 175 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 SLC25A40Q8TBP6 338 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 ANAPC16Q96DE5 110 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 FOXJ2Q9P0K8 574 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 PSG11Q9UQ72 335 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF705FA8MVS1 300 aaPredicted RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 SH2D1BO14796 132 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 ZNF705DP0CH99 300 aaPredicted RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 ZNF705BP0CI00 300 aaPredicted RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 RAC2P15153 192 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 SPCS3P61009 180 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 EDDM3AQ14507 147 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 PRAMEF6Q5VXH4 476 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 LINC00596Q86U02 117 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 RTL8AQ9BWD3 113 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 QTRT1Q9BXR0 403 aaKnown RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.51
ERCC3-203ENST00000445889 FKBP11Q9NYL4 201 aa11.9□□□□□ -0.51
ERCC3-203ENST00000445889 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 AGFG2O95081 481 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 FRMD6-AS1P0C7T7 363 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 MPV17P39210 176 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 NRN1LQ496H8 165 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 KCNIP4Q6PIL6 250 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 MRPL37Q9BZE1 423 aaKnown RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 PIGBOS1A0A0B4J2F0 54 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 RPL29P47914 159 aaKnown RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 CDC34P49427 236 aaPredicted RBP11.89□□□□□ -0.51
ERCC3-203ENST00000445889 PPP1CBP62140 327 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 PSG7Q13046 419 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 TDRG1Q3Y452 100 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
ERCC3-203ENST00000445889 PDLIM4P50479 330 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 MSMO1Q15800 293 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-203ENST00000445889 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 CISD2Q8N5K1 135 aaKnown RBP11.88□□□□□ -0.51
ERCC3-203ENST00000445889 ZNF645Q8N7E2 425 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 NEU1Q99519 415 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 TIMM9Q9Y5J7 89 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 COX5BP10606 129 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 SSMEM1Q8WWF3 244 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 NINJ1Q92982 152 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 PKIBQ9C010 78 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
ERCC3-203ENST00000445889 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 DMXL2Q8TDJ6 3036 aa11.88□□□□□ -0.51
ERCC3-203ENST00000445889 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 SPINK4O60575 86 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 CD82P27701 267 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 ERVK11-1P61568 191 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 ABHD12Q8N2K0 398 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 NPIPB11E5RHQ5 1161 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 MBP02144 154 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 FABP6P51161 128 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 ARG2P78540 354 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 TRA2AQ13595 282 aaKnown RBP eCLIP11.87□□□□□ -0.516e-7■□□□□ 10.5
ERCC3-203ENST00000445889 UTF1Q5T230 341 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 ZNF705AQ6ZN79 300 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 OR13A1Q8NGR1 328 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 BCL2L2Q92843 193 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 COQ2Q96H96 371 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 C9orf172C9J069 976 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 SLC17A3O00476 420 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 AQP7O14520 342 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 MEOX1P50221 254 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 RNFT1Q5M7Z0 435 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 PARD6GQ9BYG4 376 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-203ENST00000445889 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
ERCC3-203ENST00000445889 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
ERCC3-203ENST00000445889 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
ERCC3-203ENST00000445889 RNF212BA8MTL3 300 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms