RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SRSF7Q16629 238 aaKnown RBP eCLIP16.15■□□□□ 0.18
VSX1-206ENST00000444511 TMEM177Q53S58 311 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 HAPLN4Q86UW8 402 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 ANKRD13BQ86YJ7 626 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 C5orf30Q96GV9 206 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 RCHY1Q96PM5 261 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 CENPOQ9BU64 300 aa16.15■□□□□ 0.18
VSX1-206ENST00000444511 SORL1Q92673 2214 aa16.14■□□□□ 0.17
VSX1-206ENST00000444511 A0A0B4J203 849 aa16.14■□□□□ 0.17
VSX1-206ENST00000444511 TRDV1A0A1B0GX56 115 aa16.14■□□□□ 0.17
VSX1-206ENST00000444511 RYR3Q15413 4870 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 SRRM4A7MD48 611 aaKnown RBP16.13■□□□□ 0.17
VSX1-206ENST00000444511 AADACP22760 399 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 ARL6IP1Q15041 203 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 VMA21Q3ZAQ7 101 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 C22orf42Q6IC83 251 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 ADTRPQ96IZ2 230 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 PHB2Q99623 299 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 ATG5Q9H1Y0 275 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 ZMAT4Q9H898 229 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 COA4Q9NYJ1 87 aa16.13■□□□□ 0.17
VSX1-206ENST00000444511 IGLV1-51P01701 117 aa16.12■□□□□ 0.17
VSX1-206ENST00000444511 Q6ZS49 121 aa16.12■□□□□ 0.17
VSX1-206ENST00000444511 H1FOOQ8IZA3 346 aaPredicted RBP16.12■□□□□ 0.17
VSX1-206ENST00000444511 TINAGL1Q9GZM7 467 aaPredicted RBP16.12■□□□□ 0.17
VSX1-206ENST00000444511 STAB2Q8WWQ8 2551 aa16.12■□□□□ 0.17
VSX1-206ENST00000444511 MSGN1A6NI15 193 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 BRI3O95415 125 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 CRYZL1O95825 349 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 APELAP0DMC3 54 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 GALP22466 123 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 DUTP33316 252 aaKnown RBP16.11■□□□□ 0.17
VSX1-206ENST00000444511 UBE2KP61086 200 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 DEFA5Q01523 94 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 TNXAQ16473 311 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 TEX45Q8NA69 505 aa16.11■□□□□ 0.17
VSX1-206ENST00000444511 IGKV1D-8A0A087WSZ0 117 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 SMIM30A4D0T7 59 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 MPPED1O15442 326 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 DTYMKP23919 212 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 KLF5Q13887 457 aaPredicted RBP16.1■□□□□ 0.17
VSX1-206ENST00000444511 PRSS8Q16651 343 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 IDO2Q6ZQW0 420 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 OR9G4Q8NGQ1 327 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 MUC7Q8TAX7 377 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 ACOT12Q8WYK0 555 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 DDB2Q92466 427 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 USMG5Q96IX5 58 aa16.1■□□□□ 0.17
VSX1-206ENST00000444511 PEF1Q9UBV8 284 aaKnown RBP16.1■□□□□ 0.17
VSX1-206ENST00000444511 ELF5Q9UKW6 265 aaPredicted RBP16.1■□□□□ 0.17
VSX1-206ENST00000444511 LINC00473A8K010 186 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 J3QRK9 145 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 SYNJ2BPP57105 145 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 TATDN3Q17R31 274 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 MRGPRG-AS1Q2M3A8 158 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 CDNFQ49AH0 187 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 ZNF343Q6P1L6 599 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 NR2C2APQ86WQ0 139 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 SGPP2Q8IWX5 399 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 OSR1Q8TAX0 266 aaPredicted RBP16.09■□□□□ 0.17
VSX1-206ENST00000444511 ST6GALNAC5Q9BVH7 336 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 RAB26Q9ULW5 256 aa16.09■□□□□ 0.17
VSX1-206ENST00000444511 OR9G9P0C7N8 305 aa16.08■□□□□ 0.16
VSX1-206ENST00000444511 IGHV4-30-4P0DP06 118 aa16.08■□□□□ 0.16
VSX1-206ENST00000444511 GABARAPL2P60520 117 aa16.08■□□□□ 0.16
VSX1-206ENST00000444511 DYRK1AQ13627 763 aa16.08■□□□□ 0.16
VSX1-206ENST00000444511 SRSF12Q8WXF0 261 aaKnown RBP16.08■□□□□ 0.16
VSX1-206ENST00000444511 DCUN1D5Q9BTE7 237 aa16.08■□□□□ 0.16
VSX1-206ENST00000444511 NOTOA8MTQ0 251 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 H0Y980 276 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 CREBL2O60519 120 aaPredicted RBP16.07■□□□□ 0.16
VSX1-206ENST00000444511 MRPS14O60783 128 aaKnown RBP16.07■□□□□ 0.16
VSX1-206ENST00000444511 ACTL6BO94805 426 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 CTXN2P0C2S0 81 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 RPEL1Q2QD12 228 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 Q8N1Y9 231 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 ZNF645Q8N7E2 425 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 ADAD2Q8NCV1 583 aaKnown RBP16.07■□□□□ 0.16
VSX1-206ENST00000444511 PRELID3BQ9Y3B1 194 aa16.07■□□□□ 0.16
VSX1-206ENST00000444511 TRBV12-3P01733 135 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 SAA1P0DJI8 122 aaPredicted RBP16.06■□□□□ 0.16
VSX1-206ENST00000444511 PSMB9P28065 219 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 UBE2UQ5VVX9 321 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 HACD4Q5VWC8 232 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 KCTD9Q7L273 389 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 DCSTAMPQ9H295 470 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 TXNL4BQ9NX01 149 aaKnown RBP16.06■□□□□ 0.16
VSX1-206ENST00000444511 OR2W1Q9Y3N9 320 aa16.06■□□□□ 0.16
VSX1-206ENST00000444511 HUWE1Q7Z6Z7 4374 aaKnown RBP16.05■□□□□ 0.16
VSX1-206ENST00000444511 FCGR3BO75015 233 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 TUSC2O75896 110 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 CD36P16671 472 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 NFYAP23511 347 aaPredicted RBP16.05■□□□□ 0.16
VSX1-206ENST00000444511 FGF9P31371 208 aaPredicted RBP16.05■□□□□ 0.16
VSX1-206ENST00000444511 CDK10Q15131 360 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 CASC10Q5T4H9 136 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 IL34Q6ZMJ4 242 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 NUDCD2Q8WVJ2 157 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 SNAPC3Q92966 411 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms