RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ACTL6BO94805 426 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 EGR1P18146 543 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 CD38P28907 300 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 GAB4Q2WGN9 574 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 TMEM144Q7Z5S9 345 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 SCCPDHQ8NBX0 429 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 OR5A2Q8NGI9 324 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 ANKRD30BLA7E2S9 258 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 NDUFS8O00217 210 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 HOXB2P14652 356 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 TIMP3P35625 211 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 PAX9P55771 341 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 MRPL49Q13405 166 aaKnown RBP4.27□□□□□ -1.73
HERC1-201ENST00000443617 RSPO4Q2I0M5 234 aaPredicted RBP4.27□□□□□ -1.73
HERC1-201ENST00000443617 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 FAM69BQ5VUD6 431 aa4.27□□□□□ -1.73
HERC1-201ENST00000443617 HELZP42694 1942 aaKnown RBP4.27□□□□□ -1.73
HERC1-201ENST00000443617 VWA1Q6PCB0 445 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 HAPLN4Q86UW8 402 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 HEYLQ9NQ87 328 aaPredicted RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 CORTO00230 105 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PPBPP02775 128 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 Q6ZS49 121 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SAXO1Q8IYX7 474 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 TNFRSF14Q92956 283 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SAP30LQ9HAJ7 183 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 IGHV2-26A0A0B4J1V2 119 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CELA2BP08218 269 aaPredicted RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 GPR183P32249 361 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SCGB2A2Q13296 93 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 A0A1B0GX78 115 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CA3P07451 260 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 LHX2P50458 406 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PMCHL2Q9BQD1 86 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A10PA6NDY2 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A18PA6NE21 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A16PA6NEW6 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A20PA6NIJ5 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A8PA6NJQ4 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A7PA6NKC0 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A22PA8MWA6 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A12PA8MX19 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A5PA8MXJ8 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A23PA8MXZ1 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 E9PLN8 166 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 MLNRO43193 412 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 WNT2P09544 360 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A15PP0C7V4 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A13PP0C7W8 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A14PP0C7W9 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 FAM90A24PP0C7X0 464 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 TFF3Q07654 80 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OR13H1Q8NG92 308 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SSMEM1Q8WWF3 244 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 HINT2Q9BX68 163 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OR2D2Q9H210 308 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PRSS12P56730 875 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 ZNF816Q0VGE8 651 aaPredicted RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 LHX8Q68G74 356 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 DAZAP1Q96EP5 407 aaKnown RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 MRGPRX1Q96LB2 322 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 YTHDF2Q9Y5A9 579 aaKnown RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 HTR1DP28221 377 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 TAAR6Q96RI8 345 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CSPG4Q6UVK1 2322 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 ODAMA1E959 279 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 RAB29O14966 203 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SMIM21Q3B7S5 101 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 TMEM191AQ9H0A3 160 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 GNG7O60262 68 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OBP2AQ9NY56 170 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OTX1P32242 354 aaPredicted RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 RPL31P62899 125 aaKnown RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 ZXDAP98168 799 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PSG9Q00887 426 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 RELBQ01201 579 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PQLC2Q6ZP29 291 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OR8B2Q96RD0 313 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 GNG12Q9UBI6 72 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 RBFOX2O43251 390 aaKnown RBP eCLIP4.26□□□□□ -1.732e-6■□□□□ 10.4
HERC1-201ENST00000443617 PLP2Q04941 152 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 GABRA6Q16445 453 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 ZNF611Q8N823 705 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 TMEM186Q96B77 213 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CLEC7AQ9BXN2 247 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 C3orf79P0CE67 100 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CD1BP29016 333 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 ATP5G3P48201 142 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OR1D5P58170 312 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 CATR1Q13166 79 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 LRRC10Q5BKY1 277 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 SP5Q6BEB4 398 aaPredicted RBP4.26□□□□□ -1.73
HERC1-201ENST00000443617 BPIFA4PQ86YQ2 179 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 OR1L3Q8NH93 324 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 PATJQ8NI35 1801 aa4.26□□□□□ -1.73
HERC1-201ENST00000443617 LOC105371242A0A075B767 164 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms