RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PRSS8Q16651 343 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 FAM209BQ5JX69 171 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 Q6ZWC4 215 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 GPHB5Q86YW7 130 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 TTC9CQ8N5M4 171 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 TEX45Q8NA69 505 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 NECAP1Q8NC96 275 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 SRSF12Q8WXF0 261 aaKnown RBP10.72□□□□□ -0.69
HMGN1-208ENST00000443046 C5orf30Q96GV9 206 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 PHB2Q99623 299 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 PLEKHJ1Q9NW61 149 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 RDH8Q9NYR8 311 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 AK3Q9UIJ7 227 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 IRGMA1A4Y4 181 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 FOXI3A8MTJ6 420 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-208ENST00000443046 TMEM14DPA8MWL7 114 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 HLA-AP01891 365 aaKnown RBP10.71□□□□□ -0.69
HMGN1-208ENST00000443046 MYL12AP19105 171 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 BMI1P35226 326 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 UBE2KP61086 200 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 TAGLNQ01995 201 aaKnown RBP10.71□□□□□ -0.69
HMGN1-208ENST00000443046 CACNG8Q8WXS5 425 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 THRSPQ92748 146 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 SDHAF2Q9NX18 166 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 MLXQ9UH92 298 aa10.71□□□□□ -0.69
HMGN1-208ENST00000443046 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 A8MWP6 167 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 SHOXO15266 292 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 SPRY2O43597 315 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 GGCTO75223 188 aaKnown RBP10.7□□□□□ -0.7
HMGN1-208ENST00000443046 OR2C1O95371 312 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 SRMP19623 302 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 RASSF2P50749 326 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 ZNF57Q68EA5 555 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-208ENST00000443046 LRRTM1Q86UE6 522 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 FAM89BQ8N5H3 189 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 TMEM80Q96HE8 168 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 LPAR5Q9H1C0 372 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 KCNK15Q9H427 330 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 HSF4Q9ULV5 492 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 PKD1P98161 4303 aa10.7□□□□□ -0.7
HMGN1-208ENST00000443046 DNAH11Q96DT5 4516 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 SOCS1O15524 211 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 MAPK3P27361 379 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-208ENST00000443046 TMEM50BP56557 158 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 TAS2R43P59537 309 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 TNXAQ16473 311 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 KLK9Q2XQG4 91 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 ANKRD55Q3KP44 614 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 PHLDA1Q8WV24 401 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-208ENST00000443046 RNF183Q96D59 192 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 C9orf16Q9BUW7 83 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
HMGN1-208ENST00000443046 PNMA8CA0A1B0GUJ8 204 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 TRDCB7Z8K6 153 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 UBE2CO00762 179 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 C8orf88P0DMB2 117 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 RRASP10301 218 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 CELP19835 753 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PRR20EP86478 221 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PRR20CP86479 221 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PRR20DP86480 221 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PRR20BP86481 221 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PRR20AP86496 221 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 VMA21Q3ZAQ7 101 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 IDO2Q6ZQW0 420 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 PHYHIPQ92561 330 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 GGHQ92820 318 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 SPIN2AQ99865 258 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 SPIN2BQ9BPZ2 258 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 OR2D2Q9H210 308 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 C12orf4Q9NQ89 552 aa10.68□□□□□ -0.7
HMGN1-208ENST00000443046 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 MPPED1O15442 326 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 CIB2O75838 187 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 ATP5HO75947 161 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 OR2J3O76001 311 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 SCAF4O95104 1147 aaKnown RBP10.67□□□□□ -0.7
HMGN1-208ENST00000443046 BPNT1O95861 308 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 SERPINB10P48595 397 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 APOC4P55056 127 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 CBX3Q13185 183 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 MED21Q13503 144 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 INSL4Q14641 139 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 RTL8BQ17RB0 113 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 TTC23Q5W5X9 447 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 ZFP1Q6P2D0 407 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 UXS1Q8NBZ7 420 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 OR4A4PQ8NGN8 299 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 CCDC140Q96MF4 163 aa10.67□□□□□ -0.7
HMGN1-208ENST00000443046 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-208ENST00000443046 MUC4Q99102 2169 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 KIR2DL5BA0A0G2JN68 375 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 KIR2DL5BA0A0G2JPC4 375 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms