RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 WNT10AQ9GZT5 417 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 FBXL15Q9H469 300 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
USP39-205ENST00000442708 LIN7CQ9NUP9 197 aaKnown RBP12.68□□□□□ -0.38
USP39-205ENST00000442708 ANK2Q01484 3957 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 RRHO14718 337 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 FCGR3BO75015 233 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 IFNA6P05013 189 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 VDAC2P45880 294 aaPredicted RBP12.67□□□□□ -0.38
USP39-205ENST00000442708 TMEM177Q53S58 311 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 ZNF66Q6ZN08 573 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 ARRDC1Q8N5I2 433 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 KLHDC1Q8N7A1 406 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 C3orf56Q8N813 242 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 WIPF2Q8TF74 440 aaPredicted RBP12.67□□□□□ -0.38
USP39-205ENST00000442708 TCTEX1D2Q8WW35 142 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
USP39-205ENST00000442708 RNF5Q99942 180 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 RASL11BQ9BPW5 248 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 RSRP1Q9BUV0 290 aa12.67□□□□□ -0.38
USP39-205ENST00000442708 FCN1O00602 326 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
USP39-205ENST00000442708 CRYZL1O95825 349 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 IGHG2P01859 326 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 RRASP10301 218 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 UCP3P55916 312 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 TAGLNQ01995 201 aaKnown RBP12.66□□□□□ -0.38
USP39-205ENST00000442708 KLF9Q13886 244 aaPredicted RBP12.66□□□□□ -0.38
USP39-205ENST00000442708 BAK1Q16611 211 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
USP39-205ENST00000442708 C10orf99Q6UWK7 81 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 NOL4LQ96MY1 436 aaPredicted RBP12.66□□□□□ -0.38
USP39-205ENST00000442708 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
USP39-205ENST00000442708 GPR31O00270 319 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 SLC25A17O43808 307 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 RAMP3O60896 148 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 CRYGBP07316 175 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 PI3P19957 117 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 PPP5CP53041 499 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 MEF2DQ14814 521 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 SLC35E3Q7Z769 313 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 OR51H1Q8NH63 302 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
USP39-205ENST00000442708 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
USP39-205ENST00000442708 IGHV7-81A0A0B4J1V7 117 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 SHOXO15266 292 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 HLA-DRB1P01911 266 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 RLN1P04808 185 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 NDPQ00604 133 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 PJVKQ0ZLH3 352 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 OR51S1Q8NGJ8 323 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 CLCC1Q96S66 551 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
USP39-205ENST00000442708 CITED1Q99966 193 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 KIAA1456Q9P272 454 aa12.64□□□□□ -0.39
USP39-205ENST00000442708 SPDEFO95238 335 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 PGAM2P15259 253 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 LGALS7P47929 136 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 SSBP2P81877 361 aaPredicted RBP12.63□□□□□ -0.39
USP39-205ENST00000442708 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 SLC38A6Q8IZM9 456 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 SPAG16Q8N0X2 631 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 GDPD1Q8N9F7 314 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 OR13C8Q8NGS7 320 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 HRASLSQ9HDD0 168 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
USP39-205ENST00000442708 DISC1C4P0D8 188 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 EGR2P11161 476 aaPredicted RBP12.62□□□□□ -0.39
USP39-205ENST00000442708 CX3CL1P78423 397 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 ZNF45Q02386 682 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 CBX3Q13185 183 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 PLGLAQ15195 96 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 TOMM5Q8N4H5 51 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 C11orf44Q8N8P7 122 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 OSR1Q8TAX0 266 aaPredicted RBP12.62□□□□□ -0.39
USP39-205ENST00000442708 BORCS5Q969J3 196 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 SLC2A8Q9NY64 477 aa12.62□□□□□ -0.39
USP39-205ENST00000442708 TNCP24821 2201 aa12.61□□□□□ -0.39
USP39-205ENST00000442708 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
USP39-205ENST00000442708 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms