RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ST6GALNAC2Q9UJ37 374 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ERRFI1Q9UJM3 462 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 JPT1Q9UK76 154 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PLAGL1Q9UM63 463 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 DHDHQ9UQ10 334 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CELSR2Q9HCU4 2923 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TMEM202A6NGA9 273 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PIN1P1O15428 100 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 DEDDO75618 318 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CST7O76096 145 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OR7C1O76099 320 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 VENTXO95231 258 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ABHD16AO95870 558 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 GYPAP02724 150 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CPMP14384 443 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 HOXB9P17482 250 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 PSMB5P28074 263 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 EMP1P54849 157 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 RUNX1Q01196 453 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TBR1Q16650 682 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SPATA31B1PQ5VZV4 182 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 LCN12Q6JVE5 192 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ADAMTSL5Q6ZMM2 481 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CYP2G1PQ6ZSU1 146 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 POC1AQ8NBT0 407 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 SLC16A11Q8NCK7 471 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 OR8G5Q8NG78 346 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CLDND2Q8NHS1 167 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 WDR34Q96EX3 536 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 ADAT3Q96EY9 351 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 MRPL18Q9H0U6 180 aaKnown RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 ELOVL3Q9HB03 270 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 NPVFQ9HCQ7 196 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 TNFRSF19Q9NS68 423 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 C5AR2Q9P296 337 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 CLCF1Q9UBD9 225 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 BOKQ9UMX3 212 aaPredicted RBP2.39□□□□□ -2.03
LIG4-203ENST00000442234 B3GALT5Q9Y2C3 310 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 KCNE3Q9Y6H6 103 aa2.39□□□□□ -2.03
LIG4-203ENST00000442234 PKD1L1Q8TDX9 2849 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 MGAMO43451 1857 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TRAV27A0A087WT01 109 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TRAV25A0A0B4J276 109 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 IGHV3-20A0A0C4DH32 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PR80 420 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 FAM24AA6NFZ4 105 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 F5H5K5 113 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 K7EP34 96 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SLC17A2O00624 439 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SPINK4O60575 86 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 CA2P00918 260 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PRNPP04156 253 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 THY1P04216 161 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 C3orf79P0CE67 100 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 C8orf89P0DMQ9 161 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF17P17021 662 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GATA3P23771 443 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 CA7P43166 264 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 IER3P46695 156 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR1D4P47884 311 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF133P52736 654 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 PLGLB1Q02325 96 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 HHEXQ03014 270 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 EMC4Q5J8M3 183 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 BVES-AS1Q5T3Y7 98 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZFAND6Q6FIF0 208 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 MRPL54Q6P161 138 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 FAM19A2Q8N3H0 131 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 MORN4Q8NDC4 146 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR10G4Q8NGN3 311 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR5C1Q8NGR4 320 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 OR10D3Q8NH80 312 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TMEM255BQ8WV15 326 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 DAZLQ92904 295 aaKnown RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 NUS1Q96E22 293 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 DGAT2Q96PD7 388 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 SIGLEC12Q96PQ1 595 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RTBDNQ9BSG5 229 aaPredicted RBP2.38□□□□□ -2.03
LIG4-203ENST00000442234 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 EFCAB11Q9BUY7 163 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ST6GALNAC5Q9BVH7 336 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 NPFFR1Q9GZQ6 430 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 WDR54Q9H977 334 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 HES4Q9HCC6 221 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GPR84Q9NQS5 396 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 KLRF1Q9NZS2 232 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 KLHDC2Q9Y2U9 406 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 RNF115Q9Y4L5 304 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 HILPDAQ9Y5L2 63 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ENTPD2Q9Y5L3 495 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PRR14LQ5THK1 2151 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 PARP14Q460N5 1801 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 TRAV8-7A0A075B6U6 113 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 A0A087X0K7 114 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 A0A0G2JLM5 398 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE12JA6NER3 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 ZNF737O75373 536 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 GAGE7O76087 117 aa2.38□□□□□ -2.03
LIG4-203ENST00000442234 NXPH3O95157 252 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms