RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 MRPS7Q9Y2R9 242 aaKnown RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 PRELID3BQ9Y3B1 194 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 TRDV1A0A1B0GX56 115 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 BET1O15155 118 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 DTYMKP23919 212 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 RPS25P62851 125 aaKnown RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 INSL4Q14641 139 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 TBCEQ15813 527 aaPredicted RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 C19orf54Q5BKX5 351 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 C11orf87Q6NUJ2 197 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 GLDNQ6ZMI3 551 aaPredicted RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 Q6ZS49 121 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 TPRA1Q86W33 373 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 OSR1Q8TAX0 266 aaPredicted RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 FCGR1BQ92637 280 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 DLX4Q92988 240 aaPredicted RBP6.02□□□□□ -1.45
CD44-211ENST00000442151 MS4A10Q96PG2 267 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 CABLES2Q9BTV7 478 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 DCSTAMPQ9H295 470 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 OR1A1Q9P1Q5 309 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 PEMTQ9UBM1 199 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 RAB26Q9ULW5 256 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 TRBV6-7A0A0A0MS04 114 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 A0A0A6YYD4 124 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 TMEM272A0A1B0GTI8 110 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 IFITM5A6NNB3 132 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 FOXI3A8MTJ6 420 aaPredicted RBP6.01□□□□□ -1.45
CD44-211ENST00000442151 FCN1O00602 326 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 MPPED1O15442 326 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 SLC25A17O43808 307 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 TMEM127O75204 238 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 AQP4P55087 323 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 FABP5Q01469 135 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 TMEM177Q53S58 311 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 HES5Q5TA89 166 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 ZNF383Q8NA42 475 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 OR2K2Q8NGT1 345 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 VSTM2AQ8TAG5 236 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 SNAPC3Q92966 411 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 HARBI1Q96MB7 349 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 DCUN1D5Q9BTE7 237 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 ATG5Q9H1Y0 275 aa6.01□□□□□ -1.45
CD44-211ENST00000442151 PEF1Q9UBV8 284 aaKnown RBP6.01□□□□□ -1.45
CD44-211ENST00000442151 IGHV4OR15-8A0A075B7B6 117 aa6□□□□□ -1.45
CD44-211ENST00000442151 A0A087WW49 117 aa6□□□□□ -1.45
CD44-211ENST00000442151 DBX1A6NMT0 343 aa6□□□□□ -1.45
CD44-211ENST00000442151 LDLRAD4O15165 306 aa6□□□□□ -1.45
CD44-211ENST00000442151 CYB5BO43169 146 aa6□□□□□ -1.45
CD44-211ENST00000442151 TUSC2O75896 110 aa6□□□□□ -1.45
CD44-211ENST00000442151 DHFRP00374 187 aa6□□□□□ -1.45
CD44-211ENST00000442151 FCGR3AP08637 254 aa6□□□□□ -1.45
CD44-211ENST00000442151 GSTT2P0CG29 244 aa6□□□□□ -1.45
CD44-211ENST00000442151 GSTT2BP0CG30 244 aa6□□□□□ -1.45
CD44-211ENST00000442151 EGR2P11161 476 aaPredicted RBP6□□□□□ -1.45
CD44-211ENST00000442151 HIST1H1DP16402 221 aaKnown RBP6□□□□□ -1.45
CD44-211ENST00000442151 CD36P16671 472 aa6□□□□□ -1.45
CD44-211ENST00000442151 SCAND1P57086 179 aa6□□□□□ -1.45
CD44-211ENST00000442151 ARPC4P59998 168 aa6□□□□□ -1.45
CD44-211ENST00000442151 GABARAPL2P60520 117 aa6□□□□□ -1.45
CD44-211ENST00000442151 UBE2KP61086 200 aa6□□□□□ -1.45
CD44-211ENST00000442151 LCN12Q6JVE5 192 aa6□□□□□ -1.45
CD44-211ENST00000442151 BVESQ8NE79 360 aa6□□□□□ -1.45
CD44-211ENST00000442151 GRPEL2Q8TAA5 225 aa6□□□□□ -1.45
CD44-211ENST00000442151 BORCS5Q969J3 196 aa6□□□□□ -1.45
CD44-211ENST00000442151 SPIN2AQ99865 258 aa6□□□□□ -1.45
CD44-211ENST00000442151 SPIN2BQ9BPZ2 258 aa6□□□□□ -1.45
CD44-211ENST00000442151 HDHD3Q9BSH5 251 aaPredicted RBP6□□□□□ -1.45
CD44-211ENST00000442151 OR2D2Q9H210 308 aa6□□□□□ -1.45
CD44-211ENST00000442151 SDHAF2Q9NX18 166 aa6□□□□□ -1.45
CD44-211ENST00000442151 SSR3Q9UNL2 185 aa6□□□□□ -1.45
CD44-211ENST00000442151 FAM223BA6NKX1 122 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 NOTOA8MTQ0 251 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 A8MZ25 164 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 IFNA6P05013 189 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 OR9G9P0C7N8 305 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 SPNP16150 400 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 MAS1LP35410 378 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 KIR2DS2P43631 304 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 SLURP1P55000 103 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 CLDN12P56749 244 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 RPEL1Q2QD12 228 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 PLAC9Q5JTB6 97 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 CNIH2Q6PI25 160 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 GTSCR1Q86UQ5 136 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 FAM223AQ8IWN6 122 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 MMD2Q8IY49 270 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 Q8N402 240 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 DRAXINQ8NBI3 349 aaPredicted RBP5.99□□□□□ -1.45
CD44-211ENST00000442151 OR5T1Q8NG75 326 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 CNBD2Q96M20 576 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 ASCL2Q99929 193 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 RSRP1Q9BUV0 290 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 TINAGL1Q9GZM7 467 aaPredicted RBP5.99□□□□□ -1.45
CD44-211ENST00000442151 PALMDQ9NP74 551 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 NDUFB11Q9NX14 153 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 COA4Q9NYJ1 87 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 SIGLEC8Q9NYZ4 499 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 NKX1-2Q9UD57 310 aaPredicted RBP5.99□□□□□ -1.45
CD44-211ENST00000442151 MFNGO00587 321 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms