RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PMS2P5A8MQ11 134 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-203ENST00000441443 TMPRSS2O15393 492 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 CBR3O75828 277 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 NGFP01138 241 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 COMPP49747 757 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-203ENST00000441443 YPEL3P61236 119 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-203ENST00000441443 ZXDAP98168 799 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 ABHD3Q8WU67 409 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 MRPL18Q9H0U6 180 aaKnown RBP17.05■□□□□ 0.32
SHOX2-203ENST00000441443 R4GN57 208 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 SLC17A3O00476 420 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 KRTDAPP60985 99 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 ZNF90Q03938 601 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 OR2Y1Q8NGV0 311 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 CIB3Q96Q77 187 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-203ENST00000441443 WDR54Q9H977 334 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 ZFP30Q9Y2G7 519 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 KIAA1549Q9HCM3 1950 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 DEGS1O15121 323 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 PDE6DO43924 150 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 RHBDL1O75783 438 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 HSPB7Q9UBY9 170 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 RANP62826 216 aaKnown RBP17.04■□□□□ 0.32
SHOX2-203ENST00000441443 BTF3L4Q96K17 158 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 GUCD1Q96NT3 240 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 TRAPPC2LQ9UL33 140 aa17.04■□□□□ 0.32
SHOX2-203ENST00000441443 LRP5LA4QPB2 252 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 RBMXL2O75526 392 aaKnown RBP17.03■□□□□ 0.32
SHOX2-203ENST00000441443 EDDM3BP56851 147 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 ATP6V1FQ16864 119 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 FAM53AQ6NSI3 398 aaPredicted RBP17.03■□□□□ 0.32
SHOX2-203ENST00000441443 COLCA1Q6ZS62 124 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 FAM58AQ8N1B3 248 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 PRRG4Q9BZD6 226 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 ASCL3Q9NQ33 180 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 FBXL7Q9UJT9 491 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 ODAMA1E959 279 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 SIRPB1O00241 398 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 SELENOTP62341 195 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 MCEMP1Q8IX19 187 aa17.03■□□□□ 0.32
SHOX2-203ENST00000441443 FAM90A26D6RGX4 464 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 ZNF808Q8N4W9 903 aaPredicted RBP17.02■□□□□ 0.32
SHOX2-203ENST00000441443 DEFB123Q8N688 67 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 OCC1Q8TAD7 63 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 TRBV6-6A0A0A6YYG2 114 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 RFPL3SP0C7P2 107 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 HLA-DRB5Q30154 266 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 OR10G8Q8NGN5 311 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 SLC35E1Q96K37 410 aa17.02■□□□□ 0.32
SHOX2-203ENST00000441443 DOCK10Q96BY6 2186 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 LOC102723996A0A087X1L8 192 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 SCO2A0A1W2PP80 73 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 SYNGR4O95473 234 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 SERPINA7P05543 415 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 FBXW9Q5XUX1 488 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 GGNQ86UU5 652 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 STPG4Q8N801 248 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 OR10D3Q8NH80 312 aa17.02■□□□□ 0.31
SHOX2-203ENST00000441443 LRRC30A6NM36 301 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 GJE1A6NN92 205 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 FCN1O00602 326 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 SH2D1BO14796 132 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 CER1O95813 267 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 TIMP3P35625 211 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 IER3P46695 156 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 KRTCAP3Q53RY4 240 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 IGHV3-64DA0A0J9YX35 117 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 DUSP3P51452 185 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-203ENST00000441443 B3GALT5-AS1P59052 145 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 WIPI1Q5MNZ9 446 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-203ENST00000441443 KCNIP2Q9NS61 270 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 WIPI2Q9Y4P8 454 aa17.01■□□□□ 0.31
SHOX2-203ENST00000441443 A0A1W2PPV4 95 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 P04436 131 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 COL8A2P25067 703 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 FOXG1P55316 489 aaPredicted RBP17■□□□□ 0.31
SHOX2-203ENST00000441443 RPL30P62888 115 aaKnown RBP17■□□□□ 0.31
SHOX2-203ENST00000441443 ANKRD39Q53RE8 183 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 APOBEC3DQ96AK3 386 aaPredicted RBP17■□□□□ 0.31
SHOX2-203ENST00000441443 CACNA1DQ01668 2161 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 S1PR2O95136 353 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 ARF1P84077 181 aaKnown RBP17■□□□□ 0.31
SHOX2-203ENST00000441443 Q6ZVH6 145 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 C1orf210Q8IVY1 113 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 TMEM105Q8N8V8 129 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 OR1L6Q8NGR2 347 aa17■□□□□ 0.31
SHOX2-203ENST00000441443 RNASE8Q8TDE3 154 aaKnown RBP17■□□□□ 0.31
SHOX2-203ENST00000441443 ZNF503-AS2A6NEH8 195 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 NTN3O00634 580 aaPredicted RBP16.99■□□□□ 0.31
SHOX2-203ENST00000441443 SIGLECL1Q8N7X8 197 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 LRFN3Q9BTN0 628 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 TRAV34A0A0B4J273 112 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 DIRC3C9JPN6 131 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 C17orf112F2Z3M2 114 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 SPINK4O60575 86 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 NDUFB8O95169 186 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 SRYQ05066 204 aa16.99■□□□□ 0.31
SHOX2-203ENST00000441443 SPATA45Q537H7 98 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms