RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 RPL31P62899 125 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 VAMP2P63027 116 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 TCF23Q7RTU1 214 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 OR8H3Q8N146 312 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 LSM10Q969L4 123 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 SDHAF2Q9NX18 166 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
TNFRSF1A-204ENST00000440083 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 A0A1B0GU03 582 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 DVL1O14640 695 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 AVPP01185 164 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 SLC25A6P12236 298 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 LPAR6P43657 344 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 LOXL3P58215 753 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 OR2B11Q5JQS5 317 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 PRAMEF5Q5TYX0 476 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 ZNF714Q96N38 554 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 C19orf12Q9NSK7 152 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 MXRA5Q9NR99 2828 aa11.9□□□□□ -0.5
TNFRSF1A-204ENST00000440083 M0R1X1 148 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GPR137BO60478 399 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CFDP00746 253 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 P2RY1P47900 373 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PAX2Q02962 417 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 EIF4EBP1Q13541 118 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 C1orf229Q6ZS94 237 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CD300LFQ8TDQ1 290 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
TNFRSF1A-204ENST00000440083 LOC105371242A0A075B767 164 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGHV2-70DA0A0C4DH43 119 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 TAAR5O14804 337 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 KCNAB3O43448 404 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SSSCA1O60232 199 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CRLF1O75462 422 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 HKR1P10072 659 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 HOXB4P17483 251 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 KIR2DS2P43631 304 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GNG10P50151 68 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF273Q14593 569 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ZNF585BQ52M93 769 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CACNG5Q9UF02 275 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PRELID3BQ9Y3B1 194 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
TNFRSF1A-204ENST00000440083 RAB29O14966 203 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGKV1-39P01597 117 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGKV1D-39P04432 117 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 MMP9P14780 707 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CLLU1Q5K131 121 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 LYG1Q8N1E2 194 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 LEAP2Q969E1 77 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 ADTRPQ96IZ2 230 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 AGMATQ9BSE5 352 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 TMEM160Q9NX00 188 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GAB2Q9UQC2 676 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
TNFRSF1A-204ENST00000440083 A0A0G2JRQ6 117 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 A0A1W2PPH5 198 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SLC31A2O15432 143 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 S1PR2O95136 353 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 NXPH3O95157 252 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 IGKV1-5P01602 117 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 CCL3L1P16619 93 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 THBS3P49746 956 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 POLR2GP62487 172 aaKnown RBP eCLIP11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 GPR157Q5UAW9 335 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 STOML3Q8TAV4 291 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 PHYHIPLQ96FC7 376 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 S1PR3Q99500 378 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SLC25A31Q9H0C2 315 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
TNFRSF1A-204ENST00000440083 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms