RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 KPRPQ5T749 579 aaPredicted RBP18.46■□□□□ 0.55
VARS-217ENST00000440048 PPP1R27Q86WC6 154 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 LINC00482Q8N8I6 264 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 KLK15Q9H2R5 256 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 ANAPC10Q9UM13 185 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 NUBP2Q9Y5Y2 271 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 A3GALT2U3KPV4 340 aa18.46■□□□□ 0.55
VARS-217ENST00000440048 HPGDSO60760 199 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 CRYZL1O95825 349 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 IGLL1P15814 213 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 ELK1P19419 428 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 PRSS3P35030 304 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 MYCNOSP40205 109 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 RPL30P62888 115 aaKnown RBP18.45■□□□□ 0.54
VARS-217ENST00000440048 CDK10Q15131 360 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 MRPL41Q8IXM3 137 aaKnown RBP18.45■□□□□ 0.54
VARS-217ENST00000440048 MYOZ3Q8TDC0 251 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 FAM103A1Q9BTL3 118 aaKnown RBP18.45■□□□□ 0.54
VARS-217ENST00000440048 TNCP24821 2201 aa18.45■□□□□ 0.54
VARS-217ENST00000440048 SMIM31A0A1B0GVY4 71 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 PPYP01298 95 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 ZNF182P17025 639 aaPredicted RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 TMEM267Q0VDI3 215 aaPredicted RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 PJVKQ0ZLH3 352 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 EIF4EBP1Q13541 118 aaPredicted RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 KIAA0141Q14154 515 aaPredicted RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 TMEM65Q6PI78 240 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 KCTD9Q7L273 389 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 SECTM1Q8WVN6 248 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 RAX2Q96IS3 184 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 DUX3Q96PT4 197 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 P2RX4Q99571 388 aa18.44■□□□□ 0.54
VARS-217ENST00000440048 FOXA2Q9Y261 457 aaPredicted RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 MRPS7Q9Y2R9 242 aaKnown RBP18.44■□□□□ 0.54
VARS-217ENST00000440048 A0A1W2PN81 502 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 ARPC1BO15143 372 aaKnown RBP18.43■□□□□ 0.54
VARS-217ENST00000440048 SOX15O60248 233 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 FCGR3BO75015 233 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 NAT1P18440 290 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 CHRNA7P36544 502 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 SSBP2P81877 361 aaPredicted RBP18.43■□□□□ 0.54
VARS-217ENST00000440048 FXYD3Q14802 87 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 DEFB136Q30KP8 78 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 MZT2AQ6P582 158 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 OVCH2Q7RTZ1 564 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 TCTEX1D1Q8N7M0 179 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 OSR1Q8TAX0 266 aaPredicted RBP18.43■□□□□ 0.54
VARS-217ENST00000440048 AP3S1Q92572 193 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 ARPC1AQ92747 370 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 HSD17B10Q99714 261 aaKnown RBP18.43■□□□□ 0.54
VARS-217ENST00000440048 CCL28Q9NRJ3 127 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 PRELID3BQ9Y3B1 194 aa18.43■□□□□ 0.54
VARS-217ENST00000440048 CCL24O00175 119 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 RAB9AP51151 201 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 AKIRIN2Q53H80 203 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 OR2B11Q5JQS5 317 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 UNQ5815/PRO19632Q6UWF5 114 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 CLVS1Q8IUQ0 354 aaPredicted RBP18.42■□□□□ 0.54
VARS-217ENST00000440048 ZNF491Q8N8L2 437 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 LFNGQ8NES3 379 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 GRPEL2Q8TAA5 225 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 C4orf3Q8WVX3 66 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 GIMAP1Q8WWP7 306 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 RCC1LQ96I51 464 aaKnown RBP18.42■□□□□ 0.54
VARS-217ENST00000440048 TAS2R8Q9NYW2 309 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 EHFQ9NZC4 300 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 DNAH3Q8TD57 4116 aa18.42■□□□□ 0.54
VARS-217ENST00000440048 CNIH1O95406 144 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 UBE2KP61086 200 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 GNB1P62873 340 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 MSMO1Q15800 293 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 MRGPRG-AS1Q2M3A8 158 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 VMA21Q3ZAQ7 101 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 SNX29P2Q8IUI4 249 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 MFSD4AQ8N468 514 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 TEX45Q8NA69 505 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 GPX8Q8TED1 209 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 TCTEX1D2Q8WW35 142 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 UBE2E2Q96LR5 201 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 GPHA2Q96T91 129 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 DCUN1D5Q9BTE7 237 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 SLC5A7Q9GZV3 580 aa18.41■□□□□ 0.54
VARS-217ENST00000440048 PMP2P02689 132 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 RFX2P48378 723 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 FXYD4P59646 89 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 SPCS2Q15005 226 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 ACTBL2Q562R1 376 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 ZNF66Q6ZN08 573 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 CASTOR1Q8WTX7 329 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 GNB4Q9HAV0 340 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 VSIG4Q9Y279 399 aa18.4■□□□□ 0.54
VARS-217ENST00000440048 FAM25AB3EWG3 89 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 FAM25CB3EWG5 89 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 FAM25GB3EWG6 89 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 BRWD1-AS2P59051 145 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 TAS2R46P59540 309 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 DYRK1AQ13627 763 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 DHRS11Q6UWP2 260 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 IDO2Q6ZQW0 420 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 LYSMD2Q8IV50 215 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms