RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PROP1O75360 226 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 WNT2P09544 360 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 EDDM3BP56851 147 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 SPRNQ5BIV9 151 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 LRP11Q86VZ4 500 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 RHOVQ96L33 236 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 HEATR1Q9H583 2144 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 PATZ1Q9HBE1 687 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 CLCF1Q9UBD9 225 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
HERPUD1-204ENST00000439977 ROS1P08922 2347 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 PRSS8Q16651 343 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 INO80CQ6PI98 192 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 ZNRF1Q8ND25 227 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 P2RX4Q99571 388 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 OPN3Q9H1Y3 402 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 PGPEP1LA6NFU8 196 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 P0C879 139 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 RND2P52198 227 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 EIF4EBP1Q13541 118 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 FAM201AQ5SY85 155 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 PCGF1Q9BSM1 259 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 PRO1933Q9H354 126 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 WT1P19544 449 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 GCH1P30793 250 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 CST9LP1Q5W188 147 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 AGMATQ9BSE5 352 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 ATMQ13315 3056 aa11.29□□□□□ -0.6
HERPUD1-204ENST00000439977 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 M0R296 226 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 KBTBD11O94819 623 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 CLDN14O95500 239 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 IFNA10P01566 189 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 OPN1MWP04001 364 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 CHRNA7P36544 502 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 GAMTQ14353 236 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 S100PBPQ96BU1 408 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 H7BYZ3 331 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 SELLP14151 372 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 COX5AP20674 150 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 NPPCP23582 126 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 PRDX2P32119 198 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 GALR1P47211 349 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-204ENST00000439977 KALRNO60229 2985 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 GPR12P47775 334 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 MSMPQ1L6U9 139 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 ABHD12Q8N2K0 398 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.6
HERPUD1-204ENST00000439977 C15orf62A8K5M9 175 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 M0R1X1 148 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 HNF1AP20823 631 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 ATP5G3P48201 142 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 P2RY6Q15077 328 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
HERPUD1-204ENST00000439977 TRBV24-1A0A075B6N3 115 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 J3QW42 95 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 RRHO14718 337 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 PHOX2AO14813 284 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 SPINT2O43291 252 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 NDUFS6O75380 124 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF134P52741 427 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 TRIP6Q15654 476 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 PRAMEF5Q5TYX0 476 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 OR13D1Q8NGV5 346 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 HIST1H2BLQ99880 126 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 RAB29O14966 203 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF718Q3SXZ3 478 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms