RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 WNT10AQ9GZT5 417 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 DNAJC4Q9NNZ3 241 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 B4GALT7Q9UBV7 327 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 FZR1Q9UM11 496 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 CEP250Q9BV73 2442 aa7.65□□□□□ -1.19
COPB1-202ENST00000439561 ZNF716A6NP11 495 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 C17orf98A8MV24 154 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 CDKN1AP38936 164 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 RAB7AP51149 207 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 UBE2NP61088 152 aaKnown RBP7.64□□□□□ -1.19
COPB1-202ENST00000439561 HOXA4Q00056 320 aaPredicted RBP7.64□□□□□ -1.19
COPB1-202ENST00000439561 TRIM61Q5EBN2 209 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 COL5A1-AS1Q5SY13 56 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 ERASQ7Z444 233 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 CPAMD8Q8IZJ3 1885 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 ZNF114Q8NC26 417 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 SMRP1Q8NCR6 262 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 OR5P3Q8WZ94 311 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 C1QTNF5Q9BXJ0 243 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 PRDM14Q9GZV8 571 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 BOKQ9UMX3 212 aaPredicted RBP7.64□□□□□ -1.19
COPB1-202ENST00000439561 EYSQ5T1H1 3165 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 PI4KAP42356 2102 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 LRRC30A6NM36 301 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 MARCH11A6NNE9 402 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 SRFP11831 508 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 CHRNB4P30926 498 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 LTBRP36941 435 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
COPB1-202ENST00000439561 MMDQ15546 238 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 HLA-DRB5Q30154 266 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 ZNF585BQ52M93 769 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 SPATA45Q537H7 98 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 ABHD17BQ5VST6 288 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 LYSMD4Q5XG99 296 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 ZNF826PQ6ZT77 177 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 OR4P4Q8NGL7 312 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 DEPPQ9NTK1 212 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 POLDIP2Q9Y2S7 368 aa7.64□□□□□ -1.19
COPB1-202ENST00000439561 MT-CO2P00403 227 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 IGHEP01854 428 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 COX6A1P12074 109 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 ARG2P78540 354 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 LCN2P80188 198 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 MRPL49Q13405 166 aaKnown RBP7.63□□□□□ -1.19
COPB1-202ENST00000439561 RAB31Q13636 194 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 LPAL2Q16609 132 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 ZNF439Q8NDP4 499 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 CLCF1Q9UBD9 225 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 OR5B21A6NL26 309 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 J3QT63 122 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 VENTXO95231 258 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 GPR12P47775 334 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 CXCL12P48061 93 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 PRR31Q5SQ13 230 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 FOXL2NBQ6ZUU3 175 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 MIEN1Q9BRT3 115 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 FGF23Q9GZV9 251 aaPredicted RBP7.63□□□□□ -1.19
COPB1-202ENST00000439561 RPH3ALQ9UNE2 315 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 M0R1X1 148 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 CELA3AP09093 270 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 SOX8P57073 446 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 RPL30P62888 115 aaKnown RBP7.63□□□□□ -1.19
COPB1-202ENST00000439561 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 PRR27Q6MZM9 219 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 MOB1BQ7L9L4 216 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 FAM19A2Q8N3H0 131 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 OCC1Q8TAD7 63 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 R3HDM4Q96D70 268 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 QTRT1Q9BXR0 403 aaKnown RBP7.63□□□□□ -1.19
COPB1-202ENST00000439561 LPAR2Q9HBW0 351 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 PXMP4Q9Y6I8 212 aa7.63□□□□□ -1.19
COPB1-202ENST00000439561 ROS1P08922 2347 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 MT-CO3P00414 261 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 HOXC12P31275 282 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 ARR3P36575 388 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 GNG10P50151 68 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 RPL31P62899 125 aaKnown RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 VAMP3Q15836 100 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 TIGITQ495A1 244 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 DOLPP1Q86YN1 238 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 GCNT2Q8N0V5 402 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 ABHD12Q8N2K0 398 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 AGMATQ9BSE5 352 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 HES7Q9BYE0 225 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 RNF24Q9Y225 148 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 MPC1Q9Y5U8 109 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 NCOR1O75376 2440 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 LOC102724200A0A096LPH7 203 aaPredicted RBP7.62□□□□□ -1.19
COPB1-202ENST00000439561 WNT9BO14905 357 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 RBFOX2O43251 390 aaKnown RBP eCLIP7.62□□□□□ -1.19
COPB1-202ENST00000439561 CER1O95813 267 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 HAND1O96004 215 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 HBZP02008 142 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 UMODP07911 640 aa7.62□□□□□ -1.19
COPB1-202ENST00000439561 SSTR5P35346 364 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms