RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 CIB3Q96Q77 187 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 FBLN5Q9UBX5 448 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 DMXL2Q8TDJ6 3036 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 TRGV5A0A0B4J1U4 118 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 ETV2O00321 342 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 WNT9BO14905 357 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZG16O60844 167 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 RAMP3O60896 148 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 SERF1AO75920 110 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 CDS2O95674 445 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 CEACAM6P40199 344 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 PAX9P55771 341 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 HTD2P86397 168 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 NEU1Q99519 415 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 SRD5A3Q9H8P0 318 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 DCAF16Q9NXF7 216 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 SH2D1BO14796 132 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 F2RP25116 425 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 CTSSP25774 331 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ADMP35318 185 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 PMELP40967 661 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 TDGF1P3P51864 188 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 LHFPL4Q7Z7J7 247 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ODF3L1Q8IXM7 274 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 TECRQ9NZ01 308 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 TANC2Q9HCD6 1990 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 DYSFO75923 2080 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGKV1-6A0A0C4DH72 117 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 TOX4O94842 621 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 HRASP01112 189 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ECI1P42126 302 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 IL24Q13007 206 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 DEFB124Q8NES8 71 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ABHD14BQ96IU4 210 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF703Q9H7S9 590 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 CLCF1Q9UBD9 225 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 F6UZH7 168 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 TIMM8AO60220 97 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF766Q5HY98 468 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 PRAMEF6Q5VXH4 476 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 H1FOOQ8IZA3 346 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR1L6Q8NGR2 347 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 NINJ1Q92982 152 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 FAM122AQ96E09 287 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 NOL4LQ96MY1 436 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 VPS25Q9BRG1 176 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
CDC42SE1-202ENST00000439374 CEACAM18A8MTB9 384 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 RPL36A-HNRNPH2H7BZ11 118 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 DLEU1O43261 78 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SP1P08047 785 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 CRISP2P16562 243 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 GNG3P63215 75 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 AESQ08117 197 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 MRGPRGQ86SM5 289 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 MRGPRDQ8TDS7 321 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 TAF15Q92804 592 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 TMEM9BQ9NQ34 198 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 LAMA5O15230 3695 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 KIR2DS1A0A191URI9 304 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SNAI2O43623 268 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 CHRNB4P30926 498 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 KIR2DS4P43632 304 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 KIR2DS1Q14954 304 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 VAMP3Q15836 100 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR2D2Q9H210 308 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 A0A087WWC5 75 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 RAB7AP51149 207 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 CLDN18P56856 261 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 MRPL49Q13405 166 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 DEFB109BQ30KR1 87 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 PDLIM3Q53GG5 364 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF573Q86YE8 665 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF525Q8N782 197 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SIGLECL1Q8N7X8 197 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SLC25A40Q8TBP6 338 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 SSBP3Q9BWW4 388 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-202ENST00000439374 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 GFRA1P56159 465 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 TBC1D28Q2M2D7 210 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 CEACAM21Q3KPI0 293 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR8I2Q8N0Y5 310 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 DCTN5Q9BTE1 182 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 FGF23Q9GZV9 251 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 KCNIP1Q9NZI2 227 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 MUC6Q6W4X9 2439 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms