RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PPP5D1E7EU14 171 aa12.83□□□□□ -0.36
APP-208ENST00000439274 J3QW42 95 aa12.83□□□□□ -0.36
APP-208ENST00000439274 MBP02144 154 aa12.83□□□□□ -0.36
APP-208ENST00000439274 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
APP-208ENST00000439274 ACP7Q6ZNF0 438 aa12.83□□□□□ -0.36
APP-208ENST00000439274 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
APP-208ENST00000439274 OR1P1Q8NH06 330 aa12.83□□□□□ -0.36
APP-208ENST00000439274 QTRT1Q9BXR0 403 aaKnown RBP12.83□□□□□ -0.36
APP-208ENST00000439274 MSL2Q9HCI7 577 aa12.83□□□□□ -0.36
APP-208ENST00000439274 MANBALQ9NQG1 85 aa12.83□□□□□ -0.36
APP-208ENST00000439274 ZFHX4Q86UP3 3567 aa12.83□□□□□ -0.36
APP-208ENST00000439274 TRAV38-1A0A0B4J264 116 aa12.83□□□□□ -0.36
APP-208ENST00000439274 RAB29O14966 203 aa12.83□□□□□ -0.36
APP-208ENST00000439274 UBE2G2P60604 165 aa12.83□□□□□ -0.36
APP-208ENST00000439274 DHRS13Q6UX07 377 aa12.83□□□□□ -0.36
APP-208ENST00000439274 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
APP-208ENST00000439274 MRPL37Q9BZE1 423 aaKnown RBP12.83□□□□□ -0.36
APP-208ENST00000439274 TTC28Q96AY4 2481 aa12.82□□□□□ -0.36
APP-208ENST00000439274 MARCH11A6NNE9 402 aa12.82□□□□□ -0.36
APP-208ENST00000439274 TNFSF15O95150 251 aa12.82□□□□□ -0.36
APP-208ENST00000439274 HRASP01112 189 aa12.82□□□□□ -0.36
APP-208ENST00000439274 TGFBR3Q03167 851 aa12.82□□□□□ -0.36
APP-208ENST00000439274 WDR82Q6UXN9 313 aa12.82□□□□□ -0.36
APP-208ENST00000439274 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
APP-208ENST00000439274 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
APP-208ENST00000439274 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
APP-208ENST00000439274 C11orf94C9JXX5 98 aa12.82□□□□□ -0.36
APP-208ENST00000439274 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
APP-208ENST00000439274 CHRNA7P36544 502 aa12.82□□□□□ -0.36
APP-208ENST00000439274 EDDM3AQ14507 147 aa12.82□□□□□ -0.36
APP-208ENST00000439274 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
APP-208ENST00000439274 Q8N7P7 452 aa12.82□□□□□ -0.36
APP-208ENST00000439274 CNEP1R1Q8N9A8 125 aa12.82□□□□□ -0.36
APP-208ENST00000439274 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
APP-208ENST00000439274 IGHV3-13P01766 116 aa12.81□□□□□ -0.36
APP-208ENST00000439274 IGHV3-7P01780 117 aa12.81□□□□□ -0.36
APP-208ENST00000439274 CDC34P49427 236 aaPredicted RBP12.81□□□□□ -0.36
APP-208ENST00000439274 FABP6P51161 128 aa12.81□□□□□ -0.36
APP-208ENST00000439274 VWC2Q2TAL6 325 aa12.81□□□□□ -0.36
APP-208ENST00000439274 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
APP-208ENST00000439274 MEGF10Q96KG7 1140 aa12.81□□□□□ -0.36
APP-208ENST00000439274 FER1L6-AS2Q96M78 137 aa12.81□□□□□ -0.36
APP-208ENST00000439274 TAAR6Q96RI8 345 aa12.81□□□□□ -0.36
APP-208ENST00000439274 TRIB1Q96RU8 372 aa12.81□□□□□ -0.36
APP-208ENST00000439274 FAM234AQ9H0X4 552 aa12.81□□□□□ -0.36
APP-208ENST00000439274 DDTP30046 118 aa12.81□□□□□ -0.36
APP-208ENST00000439274 ATP5G3P48201 142 aa12.81□□□□□ -0.36
APP-208ENST00000439274 EDDM3BP56851 147 aa12.81□□□□□ -0.36
APP-208ENST00000439274 FAM3BP58499 235 aaPredicted RBP12.81□□□□□ -0.36
APP-208ENST00000439274 PKIAP61925 76 aa12.81□□□□□ -0.36
APP-208ENST00000439274 FOXF2Q12947 444 aa12.81□□□□□ -0.36
APP-208ENST00000439274 CIB3Q96Q77 187 aaPredicted RBP12.81□□□□□ -0.36
APP-208ENST00000439274 DERL1Q9BUN8 251 aa12.81□□□□□ -0.36
APP-208ENST00000439274 TIMM8AO60220 97 aaPredicted RBP12.8□□□□□ -0.36
APP-208ENST00000439274 GZMBP10144 247 aa12.8□□□□□ -0.36
APP-208ENST00000439274 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
APP-208ENST00000439274 VKORC1L1Q8N0U8 176 aa12.8□□□□□ -0.36
APP-208ENST00000439274 R3HDM4Q96D70 268 aa12.8□□□□□ -0.36
APP-208ENST00000439274 CXXC4Q9H2H0 198 aa12.8□□□□□ -0.36
APP-208ENST00000439274 ZDHHC11Q9H8X9 412 aa12.8□□□□□ -0.36
APP-208ENST00000439274 PGPEP1LA6NFU8 196 aa12.8□□□□□ -0.36
APP-208ENST00000439274 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
APP-208ENST00000439274 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
APP-208ENST00000439274 A0A087X0M5 115 aa12.79□□□□□ -0.36
APP-208ENST00000439274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
APP-208ENST00000439274 A0A1B0GX30 115 aa12.79□□□□□ -0.36
APP-208ENST00000439274 FCGR3BO75015 233 aa12.79□□□□□ -0.36
APP-208ENST00000439274 PROP1O75360 226 aa12.79□□□□□ -0.36
APP-208ENST00000439274 NUBP1P53384 320 aa12.79□□□□□ -0.36
APP-208ENST00000439274 GNB1P62873 340 aa12.79□□□□□ -0.36
APP-208ENST00000439274 GNB2P62879 340 aa12.79□□□□□ -0.36
APP-208ENST00000439274 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
APP-208ENST00000439274 DNLZQ5SXM8 178 aa12.79□□□□□ -0.36
APP-208ENST00000439274 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
APP-208ENST00000439274 INO80CQ6PI98 192 aaPredicted RBP12.79□□□□□ -0.36
APP-208ENST00000439274 CD177Q8N6Q3 437 aa12.79□□□□□ -0.36
APP-208ENST00000439274 OR6C3Q9NZP0 311 aa12.79□□□□□ -0.36
APP-208ENST00000439274 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
APP-208ENST00000439274 TSTD3H0UI37 97 aa12.79□□□□□ -0.36
APP-208ENST00000439274 COL8A2P25067 703 aa12.79□□□□□ -0.36
APP-208ENST00000439274 CD82P27701 267 aa12.79□□□□□ -0.36
APP-208ENST00000439274 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
APP-208ENST00000439274 VWA1Q6PCB0 445 aa12.79□□□□□ -0.36
APP-208ENST00000439274 OR5R1Q8NH85 324 aa12.79□□□□□ -0.36
APP-208ENST00000439274 TMEM170AQ8WVE7 144 aa12.79□□□□□ -0.36
APP-208ENST00000439274 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
APP-208ENST00000439274 WFIKKN1Q96NZ8 548 aa12.79□□□□□ -0.36
APP-208ENST00000439274 TMEM204Q9BSN7 226 aa12.79□□□□□ -0.36
APP-208ENST00000439274 PTPRBP23467 1997 aa12.78□□□□□ -0.36
APP-208ENST00000439274 IFNL4K9M1U5 179 aa12.78□□□□□ -0.36
APP-208ENST00000439274 CD1BP29016 333 aa12.78□□□□□ -0.36
APP-208ENST00000439274 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
APP-208ENST00000439274 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
APP-208ENST00000439274 Q6ZT83 130 aa12.78□□□□□ -0.36
APP-208ENST00000439274 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
APP-208ENST00000439274 WDR31Q8NA23 367 aa12.78□□□□□ -0.36
APP-208ENST00000439274 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
APP-208ENST00000439274 Q8TCH9 128 aa12.78□□□□□ -0.36
APP-208ENST00000439274 SDSLQ96GA7 329 aa12.78□□□□□ -0.36
APP-208ENST00000439274 HSD17B10Q99714 261 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms