RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GTSF1LQ9H1H1 148 aa13.45□□□□□ -0.26
DHFR-201ENST00000439211 PPYP01298 95 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 CLDN15P56746 228 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.44□□□□□ -0.26
DHFR-201ENST00000439211 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 VDAC1P21796 283 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 GFRA1P56159 465 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 OR5D13Q8NGL4 314 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 IZUMO4Q1ZYL8 232 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 OR10D3Q8NH80 312 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 MSI2Q96DH6 328 aaKnown RBP13.44□□□□□ -0.26
DHFR-201ENST00000439211 TMEM204Q9BSN7 226 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 SRXN1Q9BYN0 137 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 SLC7A10Q9NS82 523 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 R4GN57 208 aa13.44□□□□□ -0.26
DHFR-201ENST00000439211 IGLV3-12A0A075B6K2 115 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 OTX1P32242 354 aaPredicted RBP13.43□□□□□ -0.26
DHFR-201ENST00000439211 SERF2P84101 59 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 PMCHL1Q16048 86 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 C18orf12Q96KH6 178 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 TCL1AP56279 114 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 PSG4Q00888 419 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 OR5B3Q8NH48 314 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 CPT1CQ8TCG5 803 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 CCL1P22362 96 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 NPBWR2P48146 333 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 RAC3P60763 192 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 OR1K1Q8NGR3 316 aa13.43□□□□□ -0.26
DHFR-201ENST00000439211 SIRPB1O00241 398 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 RBFOX2O43251 390 aaKnown RBP eCLIP13.42□□□□□ -0.26
DHFR-201ENST00000439211 COX5AP20674 150 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 CFAP161Q6P656 301 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
DHFR-201ENST00000439211 UQCRFS1P47985 274 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 TM2D1Q9BX74 207 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 F2Z2F3 143 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 M0R2Z0 102 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 TYMSP04818 313 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 C3orf79P0CE67 100 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 SLC25A53Q5H9E4 307 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 GAPTQ8N292 157 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 TMEM38BQ9NVV0 291 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
DHFR-201ENST00000439211 YLPM1P49750 1951 aaKnown RBP13.41□□□□□ -0.26
DHFR-201ENST00000439211 S1PR2O95136 353 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 GPX1P07203 203 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 PAX2Q02962 417 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
DHFR-201ENST00000439211 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 RAB40CQ96S21 281 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 TMEM222Q9H0R3 208 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 PEF1Q9UBV8 284 aaKnown RBP13.41□□□□□ -0.26
DHFR-201ENST00000439211 SLC17A3O00476 420 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 CYB561P49447 251 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 SLC38A11Q08AI6 406 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 PCOLCEQ15113 449 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 C12orf54Q6X4T0 127 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 OR8I2Q8N0Y5 310 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 OR10W1Q8NGF6 305 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 FNDC4Q9H6D8 234 aaPredicted RBP13.41□□□□□ -0.26
DHFR-201ENST00000439211 ABI3Q9P2A4 366 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 MBD3L1Q8WWY6 194 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 OR4C12Q96R67 309 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 LRFN3Q9BTN0 628 aa13.41□□□□□ -0.26
DHFR-201ENST00000439211 CTXND1A0A1B0GTU2 59 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 PATE3B3GLJ2 98 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 ZIC3O60481 467 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 VENTXO95231 258 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 SRIP30626 198 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
DHFR-201ENST00000439211 KCNE4Q8WWG9 221 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 LAMTOR5O43504 91 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 LINC00696Q6ZRV3 163 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 PNKDQ8N490 385 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 LIME1Q9H400 295 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 CCL28Q9NRJ3 127 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 CACNG5Q9UF02 275 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 SCTP09683 121 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
DHFR-201ENST00000439211 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 LHFPL4Q7Z7J7 247 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 C10orf35Q96D05 121 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 OR2H1Q9GZK4 316 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 GNB4Q9HAV0 340 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 ELOVL5Q9NYP7 299 aa13.4□□□□□ -0.26
DHFR-201ENST00000439211 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 CLDN18P56856 261 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 ZC2HC1AQ96GY0 325 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 PPP1R3CQ9UQK1 317 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 BCL3P20749 454 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 SPATA46Q5T0L3 261 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 NINJ1Q92982 152 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 C12orf49Q9H741 205 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms