RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KIAA1456Q9P272 454 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 CARHSP1Q9Y2V2 147 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 ATP6V0CP27449 155 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 SSTR5P35346 364 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 ARL3P36405 182 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 UCP3P55916 312 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 VMA21Q3ZAQ7 101 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 PIEZO2Q9H5I5 2752 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1W2PRD5 423 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1W2PRF3 423 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1W2PRM7 423 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 TOX4O94842 621 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 MBPP02686 304 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 HABP2Q14520 560 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM18Q96B42 140 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 SNRNP40Q96DI7 357 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 PACRGQ96M98 296 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 RCC2Q9P258 522 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM131Q92545 1883 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 DUXBA0A1W2PPF3 345 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 ACP7Q6ZNF0 438 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 POC1AQ8NBT0 407 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 DTD1Q8TEA8 209 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 SPSB4Q96A44 273 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 BSCL2Q96G97 398 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 CLN8Q9UBY8 286 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 RNF115Q9Y4L5 304 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1B0GV90 55 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 CBY3A6NI87 242 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 F8VVB4 439 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 F8VWA3 439 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 SLC25A6P12236 298 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 FOSL1P15407 271 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 GNB2P62879 340 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 ACOT6Q3I5F7 207 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 MARS2Q96GW9 593 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 TP53RKQ96S44 253 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 RTBDNQ9BSG5 229 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 UBTD1Q9HAC8 227 aa9.79□□□□□ -0.84
TRAPPC9-202ENST00000438773 IGHV1-18A0A0C4DH31 117 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 MAP1LC3B2A6NCE7 125 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 RNF224P0DH78 156 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 ANOS1P23352 680 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 TBR1Q16650 682 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 CORO2AQ92828 525 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM230Q96A57 120 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 MAP1LC3BQ9GZQ8 125 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 PRR14LQ5THK1 2151 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 COLCA2A8K830 154 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 SMIM6P0DI80 62 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 PGA5P0DJD9 388 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 WT1P19544 449 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 CFPP27918 469 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 CHRNB4P30926 498 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 KIR2DS2P43631 304 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 BSPH1Q075Z2 132 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 RSG1Q9BU20 258 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 CALYQ9NYX4 217 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 FUT9Q9Y231 359 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 TIMP3P35625 211 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 PRRX1P54821 245 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 TCL1AP56279 114 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM187Q14656 261 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 FAM78BQ5VT40 261 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 ABHD14AQ9BUJ0 271 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 IGF2RP11717 2491 aa9.78□□□□□ -0.84
TRAPPC9-202ENST00000438773 C12orf77C9JDV5 145 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 OR7C2O60412 319 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 DEDDO75618 318 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 HLA-GP17693 338 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 REG1BP48304 166 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 QRFPP83859 136 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM42Q69YG0 159 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 ETFRF1Q6IPR1 90 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 ACSM6Q6P461 480 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 OR52M1Q8NGK5 317 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 ACY3Q96HD9 319 aa9.77□□□□□ -0.84
TRAPPC9-202ENST00000438773 RAB29O14966 203 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 TCAPO15273 167 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 LILRA1O75019 489 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 SLC35E4Q6ICL7 350 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 TGIF2LYQ8IUE0 185 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 TGIF2LXQ8IUE1 241 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 TMEM252Q8N6L7 170 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR8B3Q8NGG8 313 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 LEAP2Q969E1 77 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 HIST1H2BAQ96A08 127 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR8B2Q96RD0 313 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 DOCK11Q5JSL3 2073 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 TGIF2-C20orf24A0A0A6YYL0 155 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 DBX1A6NMT0 343 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 RSPO1Q2MKA7 263 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 FGFRL1Q8N441 504 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms