RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 PHB2Q99623 299 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 GINS4Q9BRT9 223 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 OR2D2Q9H210 308 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 Q9N2K0 584 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 COA4Q9NYJ1 87 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 RDH8Q9NYR8 311 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 HSF4Q9ULV5 492 aa5.97□□□□□ -1.45
VPS50-204ENST00000438395 SHOXO15266 292 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 SOCS1O15524 211 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 FABP7O15540 132 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 CREBL2O60519 120 aaPredicted RBP5.96□□□□□ -1.46
VPS50-204ENST00000438395 TUSC2O75896 110 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 SCTP09683 121 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.46
VPS50-204ENST00000438395 TALDO1P37837 337 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 PSMD7P51665 324 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 SYNJ2BPP57105 145 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 RPEL1Q2QD12 228 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 VMA21Q3ZAQ7 101 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 RNLSQ5VYX0 342 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 ZFAND6Q6FIF0 208 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 HAPLN4Q86UW8 402 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 ZNF383Q8NA42 475 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 PTX4Q96A99 478 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 FAM3DQ96BQ1 224 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 RAB3CQ96E17 227 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 ARHGAP5-AS1Q96IT6 56 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 TMEM68Q96MH6 324 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 SPATA25Q9BR10 227 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 AGMATQ9BSE5 352 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 CCDC90BQ9GZT6 254 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 LPAR5Q9H1C0 372 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 FKBP14Q9NWM8 211 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 TPRKBQ9Y3C4 175 aa5.96□□□□□ -1.46
VPS50-204ENST00000438395 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 A0A075B6Q4 140 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 A0A0A6YYD4 124 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 DENRO43583 198 aaKnown RBP5.95□□□□□ -1.46
VPS50-204ENST00000438395 IGLV1-51P01701 117 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 RRASP10301 218 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 CALRP27797 417 aaKnown RBP5.95□□□□□ -1.46
VPS50-204ENST00000438395 QRFPP83859 136 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 SRSF3P84103 164 aaKnown RBP5.95□□□□□ -1.46
VPS50-204ENST00000438395 TPBGQ13641 420 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 OGFRL1Q5TC84 451 aaPredicted RBP5.95□□□□□ -1.46
VPS50-204ENST00000438395 Q8N402 240 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 BVESQ8NE79 360 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 OR9G4Q8NGQ1 327 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 ACOT12Q8WYK0 555 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 USMG5Q96IX5 58 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 ADTRPQ96IZ2 230 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 TM2D3Q9BRN9 247 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 CENPOQ9BU64 300 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 PECRQ9BY49 303 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
VPS50-204ENST00000438395 AK6Q9Y3D8 172 aaKnown RBP5.95□□□□□ -1.46
VPS50-204ENST00000438395 LCE6AA0A183 80 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 PDCD5O14737 125 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 RGS10O43665 173 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 OR2A4O95047 310 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 DIRAS3O95661 229 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 CRYZL1O95825 349 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 FCGR3AP08637 254 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 APELAP0DMC3 54 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 MYL9P24844 172 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 CLDN12P56749 244 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 ARFRP1Q13795 201 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 TNXAQ16473 311 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 LAIR2Q6ISS4 152 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 FAM89BQ8N5H3 189 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 IL17DQ8TAD2 202 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 DYNLRB2Q8TF09 96 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 SPIN2AQ99865 258 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 SPIN2BQ9BPZ2 258 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 DCUN1D5Q9BTE7 237 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 TINAGL1Q9GZM7 467 aaPredicted RBP5.94□□□□□ -1.46
VPS50-204ENST00000438395 ACOT13Q9NPJ3 140 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 AP5S1Q9NUS5 200 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 PEF1Q9UBV8 284 aaKnown RBP5.94□□□□□ -1.46
VPS50-204ENST00000438395 RAB22AQ9UL26 194 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 MRPS7Q9Y2R9 242 aaKnown RBP5.94□□□□□ -1.46
VPS50-204ENST00000438395 LSM2Q9Y333 95 aaKnown RBP5.94□□□□□ -1.46
VPS50-204ENST00000438395 V9GY05 133 aa5.94□□□□□ -1.46
VPS50-204ENST00000438395 IGKV1-6A0A0C4DH72 117 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 DPPA5A6NC42 116 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 METTL21EPA6NDL7 271 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 FAM223BA6NKX1 122 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 CASQ2O14958 399 aaPredicted RBP5.93□□□□□ -1.46
VPS50-204ENST00000438395 AIREO43918 545 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 JTBO76095 146 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 TPPPO94811 219 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 OR9G9P0C7N8 305 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 CD36P16671 472 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 LINC00205P59089 165 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 UBE2KP61086 200 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 RPS25P62851 125 aaKnown RBP5.93□□□□□ -1.46
VPS50-204ENST00000438395 RHOGP84095 191 aa5.93□□□□□ -1.46
VPS50-204ENST00000438395 DEFA5Q01523 94 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms